Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq9 163 5e-35
seq21 161 2e-34
seq4 154 3e-32
seq20 145 1e-29
>seq9
Length=252120
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | || ||||| || |||||||| || || || || || || || |||||
Sbjct 86093 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 86034
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||||||||| || ||||| |||||||||||||||
Sbjct 86033 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGA 85974
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | |||||| ||||||||||| | || || ||||||||||| || || ||
Sbjct 85973 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTA 85914
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || | |||||||||||| |||||||||
Sbjct 85913 CCGGTTAAGGTCTTGACGAAAATCTGCATT 85884
>seq21
Length=213766
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
||||||||||| || ||||| || ||||| || || ||||| || || || || || |||
Sbjct 324 AATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCT 265
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| | ||||| || ||||| || | | ||| ||||| || ||||| ||||||||||||
Sbjct 264 TCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCT 205
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | |||||| || || || |||| ||| ||||| || | ||||| ||
Sbjct 204 TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTC 145
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| ||||||||
Sbjct 144 TTACCAGTTAGAGTCTTGACGAAAATCTGCAT 113
>seq4
Length=489121
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| | || ||||| ||||||||||| || || || | || || ||||| ||
Sbjct 409861 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 409920
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| ||||| || || || || || | |||||||| || ||||| || |||||||| |||
Sbjct 409921 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGA 409980
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| || || ||||| | || || || ||||||||||| || ||
Sbjct 409981 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTA 410040
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || |||||||| ||||| || |||||| ||
Sbjct 410041 CCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 410073
>seq20
Length=97383
Score = 145 bits (160), Expect = 1e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || ||||||||||| ||||| || || || || || |||||
Sbjct 97284 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 97225
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||||| || || || || | | ||| ||||| || ||||| |||||||| ||||||
Sbjct 97224 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 97165
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||| || || ||||||| ||| || || || | ||||| || ||
Sbjct 97164 ATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTA 97105
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| || || || |||||||||
Sbjct 97104 CCTGTTAGGGTTTTAACAAAAATCTGCATT 97075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619830977560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |