Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq94 884 0.0
seq89 544 9e-150
seq158 259 5e-64
>seq94
Length=536
Score = 884 bits (980), Expect = 0.0
Identities = 498/503 (99%), Gaps = 0/503 (0%)
Strand=Plus/Plus
Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 34 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 93
Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 94 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 153
Query 8134 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 8193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 154 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 213
Query 8194 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 8253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 273
Query 8254 CTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 8313
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 CTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 333
Query 8314 ACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 8373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 334 ACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 393
Query 8374 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 8433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 453
Query 8434 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 8493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 454 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 513
Query 8494 CCTGGGACACATCTTAATAACCC 8516
|||||||||||||||||||||||
Sbjct 514 CCTGGGACACATCTTAATAACCC 536
>seq89
Length=726
Score = 544 bits (602), Expect = 9e-150
Identities = 306/309 (99%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 98414 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 98473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 402
Query 98474 TAAAGAATAAATCCCCAGTAGACATCATGCGTACTGTTGGTGTATTTCTGGCCACCTGTC 98533
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 401 TAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCCATCTGTC 342
Query 98534 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 98593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 282
Query 98594 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 98653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 222
Query 98654 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 98713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 162
Query 98714 ACCAGCTGG 98722
|||||| ||
Sbjct 161 ACCAGCAGG 153
Score = 351 bits (388), Expect = 1e-91
Identities = 202/207 (98%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 98151 CTAAGGGAGTCCATTGTCTGTTATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAG 98210
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 724 CTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAG 665
Query 98211 GGTTTGAAGGATGCGATTAAGGACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATC 98270
| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 664 GTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATC 605
Query 98271 AAGGTGACTGTGTGCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATG 98330
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 AGGGTGACTGTGTGCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATG 545
Query 98331 GTGGAAGGGGCTGCCGCGGAGGGTGAT 98357
|||||||||||||||||||||||||||
Sbjct 544 GTGGAAGGGGCTGCCGCGGAGGGTGAT 518
Score = 199 bits (220), Expect = 4e-46
Identities = 113/115 (98%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 7342 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 7401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 157 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 98
Query 7402 GGATAGCACTCCCACTCTACTACTGGGTATTATATGCTGACTGTATATGCATTAG 7456
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 97 GGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATATGCATGAG 43
>seq158
Length=190
Score = 259 bits (286), Expect = 5e-64
Identities = 148/151 (98%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 151 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 92
Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 32
Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGC 96258
||| ||| |||||||||||||||||||||||
Sbjct 31 GGGACGAGGAATTTGAGGCCTGGCTTGAGGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552715259301920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |