Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq94 884 0.0 seq89 544 9e-150 seq158 259 5e-64 >seq94 Length=536 Score = 884 bits (980), Expect = 0.0 Identities = 498/503 (99%), Gaps = 0/503 (0%) Strand=Plus/Plus Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 34 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 93 Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 94 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 153 Query 8134 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 8193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 213 Query 8194 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 8253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTATTACACC 273 Query 8254 CTTAGTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 8313 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 CTTATTTTACAGTCCAAAACCGCAGGGCGGCGTGTGGGGGCTGACGCGTGCCCCCACTCC 333 Query 8314 ACAATTTCaaaaaaaaGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 8373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 ACAATTTCAAAAAAAAGAGTGGCCACTTGTCTTTGTTTATGGGCCCCATTGGCGTGGAGC 393 Query 8374 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 8433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394 CCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGTCCGCTGCTGTCGGCGTCCA 453 Query 8434 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 8493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 CTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGTTCACCTGTCTTGGTCCCTG 513 Query 8494 CCTGGGACACATCTTAATAACCC 8516 ||||||||||||||||||||||| Sbjct 514 CCTGGGACACATCTTAATAACCC 536 >seq89 Length=726 Score = 544 bits (602), Expect = 9e-150 Identities = 306/309 (99%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 98414 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 98473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 GTGATGTAACTTGTTAGGAGACGCCCTCAATCGTATTAAAAGCCGTGTATTCCCCCGCAC 402 Query 98474 TAAAGAATAAATCCCCAGTAGACATCATGCGTACTGTTGGTGTATTTCTGGCCACCTGTC 98533 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 401 TAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGCCATCTGTC 342 Query 98534 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 98593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 TTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTGGGCATACCCATGTTGTCACGTCA 282 Query 98594 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 98653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281 CTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGA 222 Query 98654 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 98713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 GCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCA 162 Query 98714 ACCAGCTGG 98722 |||||| || Sbjct 161 ACCAGCAGG 153 Score = 351 bits (388), Expect = 1e-91 Identities = 202/207 (98%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 98151 CTAAGGGAGTCCATTGTCTGTTATTTCATTGTCTTTTTACAAACTCATATATTTGCTGAG 98210 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 724 CTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAG 665 Query 98211 GGTTTGAAGGATGCGATTAAGGACCTTGTTTTGCCAAAGCCCGCTCCTACCTGCAATATC 98270 | |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 664 GTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATC 605 Query 98271 AAGGTGACTGTGTGCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATG 98330 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 AGGGTGACTGTGTGCAGCTTTGACGATGGAGTAGATTTGCCTCCCTGGTTTCCACCTATG 545 Query 98331 GTGGAAGGGGCTGCCGCGGAGGGTGAT 98357 ||||||||||||||||||||||||||| Sbjct 544 GTGGAAGGGGCTGCCGCGGAGGGTGAT 518 Score = 199 bits (220), Expect = 4e-46 Identities = 113/115 (98%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 7342 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 7401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 157 GCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAA 98 Query 7402 GGATAGCACTCCCACTCTACTACTGGGTATTATATGCTGACTGTATATGCATTAG 7456 |||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 97 GGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATATGCATGAG 43 >seq158 Length=190 Score = 259 bits (286), Expect = 5e-64 Identities = 148/151 (98%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 151 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 92 Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 96227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGG 32 Query 96228 GGGCCGATGAATTTGAGGCCTGGCTTGAGGC 96258 ||| ||| ||||||||||||||||||||||| Sbjct 31 GGGACGAGGAATTTGAGGCCTGGCTTGAGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715259301920