Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq25 127 5e-24 >seq25 Length=152031 Score = 127 bits (140), Expect = 5e-24 Identities = 181/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 334100 AATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 334159 ||||||||||| | | ||| | || || || |||| ||||| || ||||| | Sbjct 47838 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 47779 Query 334160 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCAT 334219 |||| | | |||| ||| ||||| || |||| |||||||| ||||||| | ||| Sbjct 47778 AGTTCTACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCAT 47719 Query 334220 CAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAG 334279 || |||||| ||||| || ||||| || ||||| ||||| || || | | | ||||| Sbjct 47718 CAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCAA 47659 Query 334280 ATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 334339 | ||| | || |||||||| | || || |||| || ||||| || || ||||| | Sbjct 47658 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 47599 Query 334340 ACACAGATCCTCACC 334354 ||| ||||| ||||| Sbjct 47598 ACATAGATCTTCACC 47584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876848865050