Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_010237.1
Length=63395
Score E
Sequences producing significant alignments: (Bits) Value
seq86 235 2e-57
>seq86
Length=863
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 61853 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 61912
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 61913 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 61972
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 61973 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 62007
| ||||||||||||| |||||||| ||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 4828 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4887
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 4888 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4947
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 4948 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 4982
| ||||||||||||| |||||||| ||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 4520 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4579
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 4580 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4636
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Score = 158 bits (174), Expect = 5e-34
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 61545 TGCTGCTCCCAGCTCAACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 61604
||||| | | |||||||| | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 61605 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 61661
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 202738648992868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |