Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq86 282 2e-71 >seq86 Length=863 Score = 282 bits (312), Expect = 2e-71 Identities = 180/196 (92%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 58287 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 58346 ||||||||| || || |||||||| ||||||| ||| || || |||||||| ||||||| Sbjct 410 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 351 Query 58347 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACGCGCAGCTTCCCTACCGTAAGCG 58406 |||||||||||||||||||||||| |||||||||||| ||||| |||||||| || |||| Sbjct 350 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 291 Query 58407 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 58466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 231 Query 58467 CCAGCAGTGCCAGCAC 58482 |||||||| ||||||| Sbjct 230 CCAGCAGTTCCAGCAC 215 Score = 113 bits (124), Expect = 2e-20 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 58991 GCTCACTTCACACCTCTCTGTTTGTTGATAAGTTCAATATCCTGCTGGCAACTGGCGCAA 59050 ||||||||| |||||||||||| |||||||||| | ||||| ||||||||| || ||| Sbjct 112 GCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAA 53 Query 59051 GTTCGGCATCCGCGAACAGCCTGGCGTCGCCGCTCATCTATCGGATCGCCAC 59102 || || || || |||| || |||||| || ||||||||||||||||||| Sbjct 52 GTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194677884467262