Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08] 129 sequences; 9,355,550 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq32 118 9e-22 seq13 113 4e-20 seq9 104 2e-17 >seq32 Length=251920 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || |||||||| | |||||||| | ||||| | || |||||||| || Sbjct 20201 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 20142 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || | ||| | || | ||| ||||| || || ||||| ||||||| Sbjct 20141 CGACACTATTGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCTCCTGACC 20083 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || ||||| || || ||||| || |||| | | ||| || || |||| Sbjct 20082 AACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACA 20023 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| || || || | || || || || || | ||||| || Sbjct 20022 ACATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 19974 >seq13 Length=213781 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || ||||| | ||||| | || || ||||| || Sbjct 213633 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213574 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || |||| || | || | ||| ||||| ||||| ||||| ||||| Sbjct 213573 GATACTATTGATAACGTCA---AATCTAAGATTCAA-GACAAGGAAGGTATTCCTCCTGA 213518 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | || || || || || ||| | ||||| | | | ||| | ||||| Sbjct 213517 CCAGCAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTA 213458 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||| |||||||| || || || || |||| || ||||| || Sbjct 213457 CAATATTCAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGAGGTGG 213407 >seq9 Length=658273 Score = 104 bits (114), Expect = 2e-17 Identities = 148/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||| || || || ||||| || |||||||| | || || | ||||| ||||| Sbjct 572393 AAAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTC 572334 Query 25055 GTCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| || Sbjct 572333 CTCCGACACCATCGA--CAATGTCAAGTCCAAGATTCAA-GACAAGGAAGGAATTCCTCC 572277 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||||||| || | |||||||| || || ||| | ||||| | | | ||| || || Sbjct 572276 TGACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGA 572217 Query 25172 TTACAATATTCAAAAAGAATCCAC 25195 ||||| || || || || || || Sbjct 572216 CTACAACATCCAGAAGGAGTCTAC 572193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327318727135