Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08] 129 sequences; 9,355,550 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq14 123 2e-23 seq13 123 2e-23 seq32 122 6e-23 seq9 122 6e-23 seq114 107 1e-18 seq113 107 1e-18 >seq14 Length=98111 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||||||| ||| || || ||||| || || ||||| ||||||||||| Sbjct 68 CCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAA 127 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| ||||||| | ||| || ||||| | || ||||| || ||||| ||| Sbjct 128 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGA 187 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||| ||| ||| ||| | || ||||| || || || Sbjct 188 ATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACC 247 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || | || || || |||||||| || ||||| |||||||| ||||| ||| Sbjct 248 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTTT 298 >seq13 Length=213781 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | |||||| || || ||||| || || || ||||| || |||||||| Sbjct 213407 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 213466 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| ||||||| | ||| || |||||| | |||||||| || ||||| ||| Sbjct 213467 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 213526 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || ||| || | || |||||||| ||||| Sbjct 213527 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 213586 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || ||||| || ||||| || || ||||| |||||| Sbjct 213587 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCATA 213634 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||| ||| || || ||||| || || || || |||||||| || Sbjct 213635 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 213694 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||| ||||| || |||||| | |||||||| || ||||| ||| Sbjct 213695 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 213754 Query 15070 ATTCCTTCCTTGTC 15083 || ||||||||||| Sbjct 213755 ATACCTTCCTTGTC 213768 >seq32 Length=251920 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| | || || || | ||||| || ||||| |||||||| || Sbjct 19974 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 20033 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | || || ||||| || ||||| | |||| |||||||||||| ||| Sbjct 20034 AAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGA 20093 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| ||| ||| || || | || ||||| ||| | || || Sbjct 20094 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACC 20153 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || ||||| || || ||||| || || || ||||| ||||||||||| || Sbjct 20154 TCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 20203 >seq9 Length=658273 Score = 122 bits (134), Expect = 6e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| | ||| | || | ||||| || || || |||||||| || Sbjct 572163 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 572222 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| ||||||| | ||| || ||||| | |||||||| |||||||| ||| Sbjct 572223 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 572282 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||| ||| || ||| | || || || ||| || || Sbjct 572283 ATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACT 572342 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181 || |||||||| || ||||| || | || || || ||||| ||||| |||| Sbjct 572343 TCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTG 572394 >seq114 Length=174 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||||||| || || || ||||| || ||||| |||||||| || Sbjct 161 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 102 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||| ||||| || |||||| | |||||||| || ||||| ||| Sbjct 101 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 42 Query 15070 ATTCCTTCCTTGTC 15083 || ||||||||||| Sbjct 41 ATACCTTCCTTGTC 28 >seq113 Length=174 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||||||| || || || ||||| || ||||| |||||||| || Sbjct 161 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 102 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | ||||| ||||| || |||||| | |||||||| || ||||| ||| Sbjct 101 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 42 Query 15070 ATTCCTTCCTTGTC 15083 || ||||||||||| Sbjct 41 ATACCTTCCTTGTC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391438112765