Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08] 129 sequences; 9,355,550 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq14 167 2e-36 seq13 143 2e-29 seq32 116 3e-21 seq114 114 1e-20 seq113 114 1e-20 >seq14 Length=98111 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || ||||| | || ||| || || ||||| ||||| ||||| || |||||||| | Sbjct 68 CCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAA 127 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||| ||||||||| ||||| || ||||| || || || || ||| Sbjct 128 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGA 187 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||||||||| || ||| ||| | || | |||||| || | ||||| Sbjct 188 ATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACC 247 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || |||| ||||| ||||| |||||||| Sbjct 248 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 294 >seq13 Length=213781 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | | ||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct 213407 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 213466 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || |||| ||||||||| || || |||||||| || || || || ||| Sbjct 213467 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 213526 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| || ||| || | || | ||| || || | || || Sbjct 213527 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 213586 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || |||| ||| || || || |||||||| Sbjct 213587 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213633 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | || ||| || || ||||| ||||| || || || ||||| || | Sbjct 213635 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 213694 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| || || |||||||| || || || || ||| Sbjct 213695 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 213754 Query 101363 ATGCCTTCTTTATCTTGAATTTT 101385 || ||||| || |||||||| || Sbjct 213755 ATACCTTCCTTGTCTTGAATCTT 213777 >seq32 Length=251920 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||| || ||||| || ||||| || | | |||||| |||| |||||||||||||| Sbjct 20004 GTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCA 20063 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| |||| ||||||||| || || ||||| || || || || ||||| || || Sbjct 20064 GCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTG 20123 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 || | || | |||||| || | ||||| || | |||| || || ||||| | || Sbjct 20124 ACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTC 20183 Query 101453 TTTACAAATATCTGCAT 101469 ||||| || || ||||| Sbjct 20184 TTTACGAAAATTTGCAT 20200 >seq114 Length=174 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | | |||||| || || || |||||||| ||||| || ||||| || | Sbjct 161 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 102 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| || || |||||||| || || || || ||| Sbjct 101 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 42 Query 101363 ATGCCTTCTTTATCTTGAATTTT 101385 || ||||| || |||||||| || Sbjct 41 ATACCTTCCTTGTCTTGAATCTT 19 >seq113 Length=174 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | | |||||| || || || |||||||| ||||| || ||||| || | Sbjct 161 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 102 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||||||||| || || |||||||| || || || || ||| Sbjct 101 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 42 Query 101363 ATGCCTTCTTTATCTTGAATTTT 101385 || ||||| || |||||||| || Sbjct 41 ATACCTTCCTTGTCTTGAATCTT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277776976053