Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08]
129 sequences; 9,355,550 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 5e-18
seq113 100 7e-16
seq114 98.7 2e-15
seq13 86.0 1e-11
seq21 84.2 5e-11
seq14 84.2 5e-11
>seq9
Length=658273
Score = 107 bits (118), Expect = 5e-18
Identities = 161/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 206158 AAGGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAA 206217
||| | |||||| ||||| || ||| || | || || || || || || ||||||
Sbjct 572398 AAGACAAAAATG---CAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAA 572342
Query 206218 GTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATT 206277
|| || || ||||| |||| || ||| ||||||||||| || |||||||||
Sbjct 572341 GTCGAGTCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATT 572282
Query 206278 TTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTG 206337
|| ||| ||| | | || || || || ||||| ||||||| || || ||| ||
Sbjct 572281 CCTCCTGACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTG 572222
Query 206338 GCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
| || |||||| ||||||| ||||||||| | ||||| ||| |||||
Sbjct 572221 TCTGACTACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGA 572174
>seq113
Length=174
Score = 100 bits (110), Expect = 7e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||||||||| || ||||| ||| || ||| ||| | | ||||||
Sbjct 10 GTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTC 69
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| || ||| | | || |||||| |||| || || |||
Sbjct 70 GCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCT 129
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
||||| ||| | ||||| |||||
Sbjct 130 ACTCTCCACTTGGTTTTAAGACT 152
>seq114
Length=174
Score = 98.7 bits (108), Expect = 2e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| ||| | | |||||||| || |||
Sbjct 19 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 78
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || ||| | | || |||||| |||| || || |||||||| |||
Sbjct 79 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCAC 138
Query 206374 CTTGTTTTGAGACT 206387
| ||||| |||||
Sbjct 139 TTGGTTTTAAGACT 152
>seq13
Length=213781
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| ||| | | |||||||| || |||
Sbjct 213777 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 213718
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || ||| | | || |||||| ||||||| || || || || |||
Sbjct 213717 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAGAAGGAATCCACCCTCCAC 213658
Query 206374 CTTGTTTTGAGA 206385
| ||| | |||
Sbjct 213657 TTGGTTCTAAGA 213646
>seq21
Length=271161
Score = 84.2 bits (92), Expect = 5e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| ||||| || | ||||| || ||||| || | ||| ||| | | ||| || |
Sbjct 182279 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 182220
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || ||
Sbjct 182219 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 182160
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
| || || || || | || || | ||| |||| || |||||||| | ||| | ||
Sbjct 182159 AATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAAC 182100
Query 173287 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 173330
|| |||||| ||| || || || || || |||||||| || ||
Sbjct 182099 AGGGTCCAATCGCCATTCTGT-TCTACTCTTTTCATGAACAGATC 182056
>seq14
Length=98111
Score = 84.2 bits (92), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| || ||||| || || |||||| | || |||||
Sbjct 297 AAAATG---CAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAG 241
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|| ||||| | || || || ||||||||||| || ||||| ||| ||
Sbjct 240 TCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCT 181
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| ||| | | || || || || ||||| ||||||| || || ||| | | |||
Sbjct 180 GACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGAT 121
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||| |||| || || || || || ||| | ||| | |||
Sbjct 120 TACAACATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGA 79
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818846671809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |