Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08]
129 sequences; 9,355,550 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq13 165 2e-35
seq9 159 7e-34
seq14 158 3e-33
seq32 156 9e-33
seq15 131 4e-25
seq113 114 3e-20
seq114 111 3e-19
>seq13
Length=213781
Score = 165 bits (182), Expect = 2e-35
Identities = 187/250 (75%), Gaps = 3/250 (1%)
Strand=Plus/Plus
Query 282853 CCTAAAAAATAAAAC---GTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTT 282909
|||||| ||| ||| || |||||| | || | | ||||| || | ||| ||
Sbjct 213384 CCTAAACAATTGAACAAAGTTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATT 213443
Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969
| ||||| || ||||| |||| ||| || | || || || ||||| || || || ||||
Sbjct 213444 CCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGA 213503
Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029
|||||||||| |||||| |||||||| ||||||||||| ||||| | ||| ||| |||
Sbjct 213504 TCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTAT 213563
Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
| ||||| || || | || || || |||||||| |||||||| || | |||||| ||||
Sbjct 213564 CAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGA 213623
Query 283090 ATATCTGCAT 283099
| ||||||||
Sbjct 213624 AAATCTGCAT 213633
Score = 105 bits (116), Expect = 1e-17
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || |||||||||||||||| ||| || | ||||| || | ||| || || || ||
Sbjct 213670 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 213729
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|||||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct 213730 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTT 213777
>seq9
Length=658273
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || ||||| || || || || || ||||||||||||||||
Sbjct 572162 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 572221
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | || || || ||||| || || ||||| |||||||||||||||||| ||
Sbjct 572222 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 572281
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||||||||| ||||| | || || | ||||| ||||| || | |||||
Sbjct 572282 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 572341
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| | || || |||||||| || || ||||| ||||| |||||||||||
Sbjct 572342 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 572392
>seq14
Length=98111
Score = 158 bits (174), Expect = 3e-33
Identities = 152/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| |||||||||||||| |||| ||| || | || || || ||||| || || |||||
Sbjct 103 TTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 162
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| |||||||| |||||| |||||||| ||||| ||||| ||||| | ||| || |
Sbjct 163 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 222
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||| |||||||| || | || || || |||||||| |||||||| || | || |||||
Sbjct 223 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 282
Query 283088 GAATATCTGCATTTT 283102
|| |||||||||||
Sbjct 283 AAAAATCTGCATTTT 297
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 301477 CATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536
||||||||| || || | | ||||||| |||| |||| ||||||| || |||||
Sbjct 45978 CATGGAGAATGCTTTGTCCTGAACGATGGTGGTGAAGTCGATTTGGATCTCGGAAACTAC 46037
Query 301537 GAACGTTTCACTTCATTAAC-CCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTT 301594
||| | | | ||| || | || ||| | | || || |||| ||||| | || |
Sbjct 46038 GAAAGAT--ATCTCAATATCACCCTAACCAGAGATCACAACATTACCACTGGTAAGGTCT 46095
Query 301595 ATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654
||| ||| ||||||||||| ||| | | ||| |||||||||||| || || || ||||
Sbjct 46096 ATTCAAAGGTTATCGAAAAGGAAAGAAACGGTGACTATCTCGGAAAAACTGTCCAGGTTG 46155
Query 301655 TTCCCCACATCACCGATG 301672
| || ||| | ||| |||
Sbjct 46156 TCCCTCACTTAACCAATG 46173
>seq32
Length=251920
Score = 156 bits (172), Expect = 9e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | ||| |||| || || || || |||||||||||||||||||
Sbjct 19973 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 20032
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | |||||||| | ||| || || |||||||||| ||| ||||||||| ||
Sbjct 20033 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 20092
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | || |||||||| |||| || ||
Sbjct 20093 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 20152
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||||| |||||||| || | ||||| ||||| || ||||||||
Sbjct 20153 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 20203
>seq15
Length=152029
Score = 131 bits (144), Expect = 4e-25
Identities = 184/256 (72%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|||||||||||| | || |||| | ||| || || |||| ||| ||||| || || |
Sbjct 47833 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 47774
Query 317007 AGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065
|||| | | | | ||| | | ||||| || || | |||||||| |||| || ||||
Sbjct 47773 AGTTCT-ACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCA 47715
Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125
||| || ||||| |||||||| || || || || |||||||| || | | ||||||
Sbjct 47714 TCAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCA 47655
Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185
| || | || |||||||| | |||||| |||| || ||||| ||||||||||| |
Sbjct 47654 AACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGT 47595
Query 317186 CACACAGGTCCTCGCC 317201
||| || || || ||
Sbjct 47594 TACATAGATCTTCACC 47579
>seq113
Length=174
Score = 114 bits (126), Expect = 3e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || ||
Sbjct 126 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 67
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||||||||| |||||| |||||||| ||||||||||| ||||| | |||||| |
Sbjct 66 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTT 7
Query 283028 ATCGAT 283033
|| ||
Sbjct 6 GTCAAT 1
>seq114
Length=174
Score = 111 bits (122), Expect = 3e-19
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || ||
Sbjct 126 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 67
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||||||||| |||||| |||||||| ||||||||||| ||||| | || ||| |
Sbjct 66 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTT 7
Query 283028 ATCGAT 283033
|| ||
Sbjct 6 GTCAAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737469936366
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |