Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08]
145 sequences; 9,349,220 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq27 311 1e-79
seq22 170 2e-37
>seq27
Length=401273
Score = 311 bits (344), Expect = 1e-79
Identities = 1211/1903 (64%), Gaps = 45/1903 (2%)
Strand=Plus/Plus
Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 217952 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 218011
Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 218012 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 218071
Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 218072 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 218131
Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 218132 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 218191
Query 62275 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
|| || | ||| | ||| ||||| || || ||| || || ||| || |
Sbjct 218192 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 218251
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTT 62391
| | ||| | ||| | || || | | | | | | || ||||| | ||
Sbjct 218252 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 218311
Query 62392 GGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62451
| |||||||||| ||||| | || | ||| || || || || ||||| | |||
Sbjct 218312 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 218371
Query 62452 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62511
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 218372 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 218431
Query 62512 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACG 62571
|||| | ||| | || || |||| || |||||| | ||| || || || |
Sbjct 218432 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 218491
Query 62572 G-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCT 62624
| | | ||| |||||| | ||| || | | || || |||
Sbjct 218492 GCTTCTTGTCCCACAAGTC-------ATATTGCAAAATGCCCTGAGATGCTGGAGAACCT 218544
Query 62625 ACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCG 62684
| || || || | |||||| | | |||| || || || || || |
Sbjct 218545 TGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCA 218604
Query 62685 TAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGA 62744
| || || |||||||| |||| |||| || | || ||||| || |||||| |||
Sbjct 218605 TGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA 218664
Query 62745 TAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804
| || ||||| || || ||||| ||||||||||| | | | ||||||||||
Sbjct 218665 ATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTA 218724
Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864
| | |||| || | ||||||||||| || ||| |||| | || |||||| | ||
Sbjct 218725 CGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTC 218784
Query 62865 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC----- 62919
| || | || |||||| | || | ||| || ||| | | | |
Sbjct 218785 AAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGA 218844
Query 62920 ----CATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACACACGGCTACC 62972
|||| || ||| | | | || |||| ||| |||| ||||| || || |
Sbjct 218845 GTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTC 218904
Query 62973 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 63032
|| | | | |||| | || ||| |||||| ||| | || || ||
Sbjct 218905 TCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCC 218964
Query 63033 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63092
|| || | || ||| | ||||||||||| ||||||||||| || |||||||||||||||
Sbjct 218965 AAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCA 219024
Query 63093 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63152
||||| | || | || | || || | ||| | | | || || || | ||||
Sbjct 219025 GTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTG 219080
Query 63153 TATCTC----CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63208
| | | | ||| |||||||| |||||| || || || ||||| | ||
Sbjct 219081 TCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGAC 219140
Query 63209 ATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63268
| | | | | |||| |||| ||| | | || | ||| || || | | | ||
Sbjct 219141 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 219200
Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328
|| |||||| || |||||||| ||||| | ||| |||| ||||| | ||| ||
Sbjct 219201 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 219260
Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388
||| || || ||||| || ||| | ||| || | || || | |||||| || ||
Sbjct 219261 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 219320
Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448
|||||| | || | | ||||| |||||||| || || || || | || | ||| ||
Sbjct 219321 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 219380
Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508
||| || | || |||| ||||||||||||||| || || |||| || ||||| | ||
Sbjct 219381 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 219440
Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568
||| ||| |||||||||||||| ||| | ||| ||||| || || |||| ||
Sbjct 219441 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 219500
Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628
|||||| || ||| || || || || || |||||||| || ||||| ||||
Sbjct 219501 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 219560
Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688
|| || ||||| |||||||| | ||| || || || ||||| | ||||||||
Sbjct 219561 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 219620
Query 63689 AGCGTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63744
|| || || || | || ||| |||| || || || |||||| || | |
Sbjct 219621 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 219676
Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
| || |||||| || | || |||||||| | || ||| ||||| | ||| |||
Sbjct 219677 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 219736
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
|| || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| |
Sbjct 219737 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 219796
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907
| |||||||| ||||| | |||| | || || |||| |||
Sbjct 219797 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 219839
>seq22
Length=433738
Score = 170 bits (188), Expect = 2e-37
Identities = 574/882 (65%), Gaps = 14/882 (2%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 327764 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 327705
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| ||||| |||||| | || ||||| | ||||| |||| | |
Sbjct 327704 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 327645
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
| ||| || || ||||| || | ||| ||||| || ||||| || | |
Sbjct 327644 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 327585
Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
|| |||||||| | || ||| | | || ||| || || || | ||| |||||
Sbjct 327584 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 327526
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589
| |||| |||| ||||| | | || |||||| ||| | ||| || || ||
Sbjct 327525 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 327466
Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649
|| ||| | ||||||||||| | ||| | || || || || || | || |||||
Sbjct 327465 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 327406
Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709
|| || | ||| || | ||| || || ||||| || ||||| ||||||||||| || ||
Sbjct 327405 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 327346
Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-CT 33765
|| ||||| ||||||| | | || | | || | || ||| ||||| ||
Sbjct 327345 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 327286
Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825
|| ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 327285 CATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 327227
Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGA 33883
| | || || |||||| | |||||||| |||| || || || | || ||
Sbjct 327226 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGGA 327169
Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943
|||||||| || || ||||| || ||||| || ||| | || |||| || || ||
Sbjct 327168 GTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAAC 327109
Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003
|| | || || ||| | || |||||||| || || || ||| ||| ||||| ||
Sbjct 327108 CTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAA 327049
Query 34004 CGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCATT 34060
|| | || || || ||||||| | | || | | |||||||| ||||
Sbjct 327048 GGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATG 326989
Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120
| ||| ||| | || | ||| || | |||||||| || || || |||| || ||
Sbjct 326988 CAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTA 326929
Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||| | |||||| || || || | | ||||| | |||||
Sbjct 326928 CATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 326887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816458455600
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