Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08]
145 sequences; 9,349,220 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq27 172 7e-38
seq22 134 2e-26
>seq27
Length=401273
Score = 172 bits (190), Expect = 7e-38
Identities = 939/1474 (64%), Gaps = 53/1474 (4%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 218341 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 218400
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| ||||| | || | ||| | | ||| ||| |
Sbjct 218401 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 218460
Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
||||| | ||||| || | | | || | || | ||||||| ||| | || |
Sbjct 218461 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 218518
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 218519 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 218578
Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 218579 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 218638
Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260
||||| || |||||||| | | | || ||||| |||| || | |||||
Sbjct 218639 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 218698
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 116319
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 218699 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 218757
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 218758 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 218817
Query 116380 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 116433
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 218818 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 218877
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 218878 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 218934
Query 116494 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 218935 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 218994
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|||||||| || ||||| |||| || || || || ||||| | || || || || | |
Sbjct 218995 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 219054
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 116666
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 219055 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 219110
Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGAC 116725
||| | ||||||| || || || | || | || | || || || || | | ||||
Sbjct 219111 GTACAATTCCTCAAATTCATCTCC-ATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAG 219169
Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785
|||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 219170 AGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACA 219229
Query 116786 GCGCCGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| | ||| | || | | | || || || | | || || || ||| | ||
Sbjct 219230 AAGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCA 219288
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904
| ||| | | ||| || || ||||| || |||| ||||| || | || || ||
Sbjct 219289 ATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG---GA 219345
Query 116905 CG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
|| |||| | |||| ||||| | || || ||| || || | | |||||||
Sbjct 219346 CGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGA 219405
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017
|| ||||||| || || || || || ||| || | ||| ||| | | ||
Sbjct 219406 ATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT-GGCACGAATATT 219464
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
|| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 219465 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 219524
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 219525 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 219584
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
||| || ||||||||||| || || || || | || || |||| |||| || ||
Sbjct 219585 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATAC-TTCTGA 219642
Query 117198 CATCTTATCGT---AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
| || || || | || || | || | |||||| || || ||||| ||||| |
Sbjct 219643 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 219701
Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGG 117312
|| ||||||| || || ||| || ||| || || |||||| | ||| | |||
Sbjct 219702 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGG 219759
Query 117313 TAAC-TCTTCTCCAAGGTCTTGAGACCAAAATAG 117345
||| |||| ||||||||||||| ||||| |||
Sbjct 219760 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAG 219792
>seq22
Length=433738
Score = 134 bits (148), Expect = 2e-26
Identities = 388/587 (66%), Gaps = 25/587 (4%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 327471 AGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 327412
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 327411 TGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGAT 327352
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC-- 127695
||||| ||| ||||| |||| | ||| || || || | | | || |||
Sbjct 327351 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAG 327296
Query 127696 -AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753
|| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || |
Sbjct 327295 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 327236
Query 127754 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 127811
| | | || ||| | ||| ||||||||||||||| |||| || || || |
Sbjct 327235 TGAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGT 327179
Query 127812 ATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870
| || ||| ||| | | | ||| || | ||| | |||| || | ||||||
Sbjct 327178 AAGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCG 327120
Query 127871 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 127930
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 327119 GGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAG 327060
Query 127931 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 327059 GCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGA 327003
Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044
| |||||||| | | |||||| || |||| ||||| ||||||||| | |
Sbjct 327002 TTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCT 326943
Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
| |||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 326942 TCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 326896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506088018200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |