Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08]
145 sequences; 9,349,220 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq27 246 4e-60
>seq27
Length=401273
Score = 246 bits (272), Expect = 4e-60
Identities = 962/1498 (64%), Gaps = 41/1498 (3%)
Strand=Plus/Plus
Query 109725 AAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTC 109784
|||||| ||||| | | || || ||||||||| | ||||| ||||||||||||||
Sbjct 218313 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 218372
Query 109785 ATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
|||| || || ||||| | ||| ||||| |||||||| || || | || | |||
Sbjct 218373 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 218432
Query 109845 TCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGT----CCCAATCATAACGACCAC 109900
|| | ||| | | || || || ||| || |||| || | || |
Sbjct 218433 TCTTAAACCTGTGGAA---ACAATCTTG-GCTTTGAGTGATTCCCATTC----CCACAGC 218484
Query 109901 TAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAAC 109960
| | | || ||||||| || ||| | | |||| || || |||||||
Sbjct 218485 TCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAAC 218542
Query 109961 CCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCG 110020
| | ||| | ||||| | || || | |||| || ||| || || || | || |
Sbjct 218543 CTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTG 218602
Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080
|||| || ||||| |||||||| ||| ||| | | | ||| | | || || |
Sbjct 218603 CATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAG 218662
Query 110081 GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140
||| | | ||||| |||| |||| ||| |||||||| | | | || || | ||
Sbjct 218663 GAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTAT 218722
Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCC 110197
||| || || | | ||| |||| ||||||||||| || | |||||| | |
Sbjct 218723 TACGCATATTCGATCTCCTAGC---TTCTGGAACGGGGTAAAAATTTCTGTCGATAATTC 218779
Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT- 110256
|| | || || || || ||||||||||| || || || | | | ||
Sbjct 218780 TGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGC 218839
Query 110257 --TTCGTCTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAG 110311
| || || | | | ||| | || ||||||||||| || | || || ||||
Sbjct 218840 AGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAG 218899
Query 110312 AAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGA 110371
|||||| || | | |||||| | |||||| || | ||| || |||||||
Sbjct 218900 CAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGA 218959
Query 110372 CACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGG 110431
|||||||||||||||| || | ||| ||| || ||||||||||| |||||| |||| |
Sbjct 218960 CACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAG 219019
Query 110432 TACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491
|||||||||| || |||| || || ||||| | ||| | | ||| || |||
Sbjct 219020 TACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTT 219079
Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551
| | ||||||||| ||||| | |||||| ||||||||||| | ||| || |
Sbjct 219080 GTCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGA 219139
Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611
| || | ||| || || | ||| |||| |||| ||||| ||| || || |
Sbjct 219140 CGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTA 219199
Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCC 110670
| || ||||||||||| ||||| ||||||| || | ||| | ||| | || || |
Sbjct 219200 CTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TC 219258
Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730
|| || | ||| ||||| || | || | ||| | | ||| || | ||||||||
Sbjct 219259 TCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGC 219318
Query 110731 TCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGT 110784
|| | || | ||| | || | | |||| ||| | |||| |||||| ||
Sbjct 219319 TCCAAGTACAAAGCAA---ATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGA 219375
Query 110785 GCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCC 110844
|| ||| ||||||||||| | ||| |||||||| |||| || ||| || |||||
Sbjct 219376 GCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCA 219435
Query 110845 CTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCAC 110904
||| ||| |||||||||| | || || |||| |||||| ||||| ||
Sbjct 219436 GCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTT 219495
Query 110905 TTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964
|| ||| ||||| || | | ||| | ||||| || ||||| || || ||
Sbjct 219496 TTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGC 219555
Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024
|||||| || || || || ||||| || || |||| || || || || || || |||
Sbjct 219556 ATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTA 219615
Query 111025 GGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083
|| | |||||| |||| | || | || ||| ||| || || || | | |
Sbjct 219616 GGAGAGGCATGAGTGAA-ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGC 219674
Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143
| || | ||| ||||| || || ||||| ||||| | || | |||||| |||
Sbjct 219675 AATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGC 219734
Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
| || |||| || | | |||||||| |||| || | |||||||| ||||||||
Sbjct 219735 AACATTACCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 219791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974932481000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |