Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08] 145 sequences; 9,349,220 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9 149 7e-31 >seq9 Length=1276501 Score = 149 bits (164), Expect = 7e-31 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| |||||| ||||| ||||| | || || || || | || || | || ||| Sbjct 1240229 ATTGGTAAAGGATTTTATGGCACCATTATCCCTCCTGTGATTCTTCGTAATTTGCTCGAG 1240170 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 ||||| | ||||||||||||||||| || ||||| | || || ||||||| ||||| Sbjct 1240169 AATCCAGGATGGTACACATCTTACACCCCATATCAGCCCGAAGTAAGTCAGGGACGATTG 1240110 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 ||| |||| |||||| |||||| |||||| || || ||||| || ||| | || || Sbjct 1240109 GAAAGTTTACTCAATTTCCAAACTGTCATCAGTGATCTGACAGGCCTCCCGGTCGCCAAT 1240050 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || ||||| || ||||| | ||||||| |||||||||||| Sbjct 1240049 GCTTCTCTTTTGGATGAGTCGTCTGCAGCTGCAGAAGCAATG 1240008 Score = 113 bits (124), Expect = 5e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 |||||||||| |||||| | |||||||| || | ||||| || || || || || | Sbjct 1238455 ATGGTGGTCAAGTATATTTAGATGGTGCTAACATGAATGCTCAAGTGGGATTAACATCCC 1238396 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 || | ||| || || ||||||||||||||||| ||||||||||| || ||||| | Sbjct 1238395 CAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTACATAAGACTTTTGCCATTCCTC 1238336 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||| || ||||| || || || || |||||| |||| Sbjct 1238335 ATGGCGGAGGAGGACCGGGTGTTGGCCCTATTTGTGT 1238299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050134157200