Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08] 145 sequences; 9,349,220 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq27 190 3e-43 seq22 129 7e-25 >seq27 Length=401273 Score = 190 bits (210), Expect = 3e-43 Identities = 935/1469 (64%), Gaps = 43/1469 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || || Sbjct 218341 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 218400 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| ||||| | || | ||| | | ||| | ||| | Sbjct 218401 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 218460 Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359 ||||| | ||||| || | | | || | || | | ||||| ||| | || | Sbjct 218461 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 218518 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 || || || || ||||| || || | || || || || | || || | | || | Sbjct 218519 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 218578 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 ||||| | || || | ||||| || || || ||||||||||| || ||| | Sbjct 218579 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 218638 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 ||||| || |||||||| | | || || ||||| |||| || | ||||| Sbjct 218639 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 218698 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598 | ||||| | | || || | || | |||||| || ||| ||| ||| | |||| Sbjct 218699 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 218757 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 |||||||| || ||||||| || || | || || || || || ||||||||||| Sbjct 218758 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 218817 Query 118659 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 118712 |||||||| | | | | || |||| || || | ||| | ||||| || Sbjct 218818 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 218877 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| ||||| |||| ||||| ||| || ||| || | |||||| | Sbjct 218878 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAG 218937 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| || |||||| ||||||||||| || || | ||| ||||||| ||| Sbjct 218938 CAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCA 218997 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 ||||| || |||||| |||| || || || || ||||| | || || || || | ||| Sbjct 218998 TCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAA 219057 Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | ||| | || ||| || || || || | ||||| || ||| Sbjct 219058 AGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTA 219113 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 | | ||||| || || || | | || | || || || || | | ||| |||| Sbjct 219114 CAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAA 219173 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 || | ||| | ||| || || || | |||||||| || || |||||||| | || Sbjct 219174 CAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGC 219233 Query 119069 CGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 | ||| | || | | | || || || | | || || || ||| | || | | Sbjct 219234 GGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAATGA 219292 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185 || | | ||| || || ||||| || |||| ||||| || | || || | |||| Sbjct 219293 AGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGACGTT 219349 Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 |||| | |||| ||||| | |||||| ||| || || | | ||||||||| | Sbjct 219350 TGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAA 219409 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTG 119299 |||||| || || || || || ||| | || || |||| | | || || Sbjct 219410 TACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATTATG 219467 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 ||||||| |||||| || || || || |||||| || || ||| | | | | | Sbjct 219468 AATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATC 219527 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 ||| || || || || |||||| || | || | | ||| || |||||||| || Sbjct 219528 GTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGG 219587 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478 || ||||||||||| || ||||| || | || || |||| |||| | || || Sbjct 219588 GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATACTTCTGACTCA 219646 Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538 | || || || || | || | |||||| || || ||||| ||||| | || | Sbjct 219647 TAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACAC 219706 Query 119539 GCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAAC- 119595 |||||| || || ||| || ||| || || |||||| | ||| | |||||| Sbjct 219707 GCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGGTAAGA 219764 Query 119596 TCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 |||| ||||||||||||| ||||| ||| Sbjct 219765 TCTT-TCCAAGGTCTTGAATCCAAAGTAG 219792 >seq22 Length=433738 Score = 129 bits (142), Expect = 7e-25 Identities = 386/586 (66%), Gaps = 25/586 (4%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| | | | || || ||||| |||||| || |||| Sbjct 327470 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 327411 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| | ||||||||||||||| || | | ||| || || || |||||||| Sbjct 327410 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 327351 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC--- 130191 ||||| ||| ||||| |||| | ||| ||||| || | | | || ||| Sbjct 327350 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAGA 327295 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || Sbjct 327294 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 327235 Query 130251 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 | | || ||| | ||| ||||||||||||||| |||| || || || || Sbjct 327234 GAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTA 327178 Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || ||| || | | | ||| || | ||| | |||| || | |||||| Sbjct 327177 AGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGG 327119 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427 | || |||||| | ||||| | | || ||| ||||| || || || Sbjct 327118 GAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGG 327059 Query 130428 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481 ||||||| || || |||| | | | | |||||| |||||| ||||||| | Sbjct 327058 CAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGAT 327002 Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541 | |||||||| | | |||||| || |||| ||||| ||||||||| | || Sbjct 327001 TATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTT 326942 Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587 |||| ||| || | || ||||| | | | ||||||| ||||| Sbjct 326941 CGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 326896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434079086200