Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6 145 6e-30 >seq6 Length=538791 Score = 145 bits (160), Expect = 6e-30 Identities = 380/576 (66%), Gaps = 19/576 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| || ||||| |||||||||||| | |||||||||||| | ||| ||| Sbjct 311652 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 311593 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 || ||| | || ||||||||| | |||||| | | || ||| | || Sbjct 311592 TGTAAGACAGACTACACTGGACAAGGGTTTGATCAACTTTCTAGGGTAATTGAAACTCTT 311533 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 || || ||| | ||||||||||| || | | || |||||| || |||| | Sbjct 311532 CGTACCAATCCATATGACAGAAGAATAATCATGAGTGCATGGAACCCTCCAGATTTTGAG 311473 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA---------AT 20448 ||||||| | || || |||||| | | || || ||||| ||| || || Sbjct 311472 AAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTATGTTTCTTTCCCGAAAGAT 311413 Query 20449 AA------TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502 || |||||| || ||| ||||||||| || ||| |||||||||| |||| ||| Sbjct 311412 AAAAAGCCTGAATTATCTTGTTTAATGTATCAGCGCTCCTGTGATATGGGATTGGGAGTT 311353 Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562 |||||||| | || |||||||| |||| || | ||||| ||||| || ||| | Sbjct 311352 CCTTTCAACGTCGCCAGTTATGCCTTGCTGACCAAAATGATAGCACACGTAGTCGATATG 311293 Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGA- 20621 | || ||||| | || ||||| || || || ||| | ||||| | ||| |||| Sbjct 311292 GACTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTAGACCATGTAGAT 311233 Query 20622 ACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCAT-TACTC 20680 || | ||| || | | | | || |||| | |||| || || | | || || | Sbjct 311232 GCCCTGAAAGTTCAGGCTGAAAGGATTCCCAAGA-AATTTCCCACGTTAAGAATCAACAC 311174 Query 20681 GAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATC 20740 |||| |||||||| | | ||| ||| ||| || ||| | |||| |||| ||| Sbjct 311173 GAAC-ACCAAAGATATCGATGGTTTCAAATTTGAGGACTTTCAGATAGATAATTATGATC 311115 Query 20741 CCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776 | ||| | || |||| ||||||| || |||| Sbjct 311114 CTCATCCACCCATCAAAATGAAAATGTCCGTGTAAT 311079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183226456255