Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq31 136 8e-27
seq16 98.7 2e-15
>seq31
Length=431246
Score = 136 bits (150), Expect = 8e-27
Identities = 313/467 (67%), Gaps = 17/467 (4%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| ||||| ||||| || ||||||||| || | || || || || ||||||
Sbjct 101020 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGG 100961
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| ||| | |||| |||||||||| | |||| || |||
Sbjct 100960 TTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAC 100901
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| || | || |||||||| ||| |||| || | | || | || |
Sbjct 100900 GAGGGATTACACACTGACTTTGCTTGCTTGCTATTT--------TCTCATTTAAACA--A 100851
Query 102098 TCAAG--AGAAAGGAT-TC-TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
| || || |||| || |||||| || |||| || || ||| || ||| ||
Sbjct 100850 TAGAGCCAGTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAG 100791
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
| |||||| | || ||||| ||| |||| |||||||||| |||||| ||||
Sbjct 100790 GTACTTCACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCA 100731
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
||| |||| || || || || | |||| |||| | |||| ||||| || ||
Sbjct 100730 GTATGTTGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAA 100671
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| | ||| || || |||||||| || ||||| | | ||| |||||||| ||
Sbjct 100670 CGTCAACAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTT 100611
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377
||||||||||| | || || ||| || |||||||||||||
Sbjct 100610 CGAAAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 100564
>seq16
Length=271151
Score = 98.7 bits (108), Expect = 2e-15
Identities = 186/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829
|| ||||| ||| | || | ||| |||||||| |||||||| | || ||||| |
Sbjct 181812 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 181753
Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889
|||||| ||||| || ||||| ||||| | | | | | | ||| || || || |
Sbjct 181752 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 181693
Query 94890 TTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948
||| || |||| | | ||| |||||||| || || || ||||| || ||||| | |
Sbjct 181692 TTGTGG-GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCT 181634
Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008
||| | | ||| |||||||| || | ||||| || |||||||||| ||
Sbjct 181633 GACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAG 181574
Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||||| || ||||| || ||
Sbjct 181573 CAACACGCATAATCAAGTGTTGAGGACGTTC 181543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581984031845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |