Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq16 340 2e-88 seq31 172 7e-38 >seq16 Length=271151 Score = 340 bits (376), Expect = 2e-88 Identities = 1362/2142 (64%), Gaps = 37/2142 (2%) Strand=Plus/Minus Query 64828 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 64887 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 183322 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 183263 Query 64888 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 64947 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 183262 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 183203 Query 64948 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 65007 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 183202 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 183143 Query 65008 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 65067 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 183142 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 183083 Query 65068 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 183082 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 183023 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 183022 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 182963 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 |||||||||||| ||||| | || | ||| || || || || ||||| | | ||| Sbjct 182962 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 182903 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 182902 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 182843 Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 |||| | ||| | || || |||| || | |||||| | ||| || || || | Sbjct 182842 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 182783 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 65424 | ||| | ||| || | | || || ||| | | Sbjct 182782 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 182723 Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484 | ||||| | |||||| | | |||| ||| || || || || | | || | Sbjct 182722 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 182663 Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544 | ||||| || |||| |||| || | || ||||| | |||||| ||| | | Sbjct 182662 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 182603 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 182602 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 182543 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 182542 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 182483 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GC--------TCAT 65715 || |||||| | || | ||| || ||| | | | || |||| Sbjct 182482 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 182423 Query 65716 CTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 65772 | || ||| | | | || |||| ||| |||| ||||| || || ||| | | Sbjct 182422 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 182363 Query 65773 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 65832 | |||| | || ||| |||||| ||| | || ||| || || || | Sbjct 182362 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 182303 Query 65833 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 65892 || ||| | ||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 182302 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 182243 Query 65893 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 65952 | || | || | || || | ||| | | | || || || | ||||| | | Sbjct 182242 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 182187 Query 65953 T----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 66008 ||| |||||||| | |||||| || || || ||||| | || | | | Sbjct 182186 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 182127 Query 66009 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 66068 | |||||| |||| ||| | | || | ||| || || | | | |||| |||| Sbjct 182126 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 182067 Query 66069 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTT 66128 || || |||||||| ||||| | ||| ||||| ||||| | ||| ||||| || Sbjct 182066 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 182007 Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188 || ||||| || ||| | ||| || | || || |||||| || |||||||| Sbjct 182006 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 181947 Query 66189 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 66248 | || | | ||||| |||||||| || || || || | || | ||| ||||| || Sbjct 181946 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 181887 Query 66249 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 66308 | || |||| |||||||||||||||||| || ||||| || || || | || ||| | Sbjct 181886 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 181827 Query 66309 CCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368 || | |||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 181826 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 181767 Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 181766 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 181707 Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 181706 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 181647 Query 66489 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544 || || | || ||| |||| || || || |||||| || | || || Sbjct 181646 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 181591 Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 66604 |||||| || | || |||||||| | || ||| ||||| | ||| | | || Sbjct 181590 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 181531 Query 66605 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 66664 || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||| Sbjct 181530 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 181471 Query 66665 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 66724 ||||| ||||| | |||| | ||||| || | ||| | ||| | || | | | Sbjct 181470 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 181414 Query 66725 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 66781 | | | ||| |||| | ||||| ||||| || || || || |||| || | | Sbjct 181413 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 181354 Query 66782 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 66841 || || | | || | | || | || | || | |||||||| ||| || || || Sbjct 181353 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 181294 Query 66842 TATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 66901 ||||| || || | |||||||||||| || || || || | ||| || | || Sbjct 181293 AATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTC 181234 Query 66902 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || || || |||||| || || || ||||| || | ||| Sbjct 181233 AGCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 181192 >seq31 Length=431246 Score = 172 bits (190), Expect = 7e-38 Identities = 563/862 (65%), Gaps = 16/862 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||| || | |||||||| || || |||||||| | || || || || Sbjct 100584 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 100643 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| || ||||||||| | || || || | ||||| |||| | | Sbjct 100644 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 100703 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 36045 | ||| || || || || || | ||| ||||| || ||||| || | |||| Sbjct 100704 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 100763 Query 36046 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 100764 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 100821 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 100822 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 100881 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || ||||| ||||||||||| | ||| | || ||||| || || | || |||| Sbjct 100882 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 100941 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | || || | ||| || | ||| || || || ||||| ||||| |||||||| || || | Sbjct 100942 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 101001 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 36340 | || || || ||||||| | | || | | ||| ||||| ||||| | Sbjct 101002 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 101061 Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400 | || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || || Sbjct 101062 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 101120 Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 36458 | | || || |||||| | || |||||||||| || || || | || | Sbjct 101121 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 101178 Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518 | |||||||| || || || || || ||||| || ||| | || |||| || || | Sbjct 101179 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 101238 Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 36578 | || | || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 101239 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 101298 Query 36579 ACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCAT 36635 | || | || || || ||||||| || | || | | |||||||| |||| Sbjct 101299 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 101358 Query 36636 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 36695 | ||| ||| | || | ||| || | |||||||| || || || |||| || | Sbjct 101359 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 101418 Query 36696 ACATATTCCAGATGTCATGATA 36717 |||| | |||||| || || || Sbjct 101419 ACATTTGCCAGATATCGTGGTA 101440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171491881560