Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4 95.1 8e-15
seq28 89.7 3e-13
seq33 82.4 5e-11
>seq4
Length=641805
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | | ||||| ||||| || ||||| ||||| || ||||| ||||
Sbjct 409862 CACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAG 409921
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || ||||||||||| ||| ||| || | ||| || ||||| | |
Sbjct 409922 ACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 409981
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || || || || || |||| || || | | ||| |||||| | | |
Sbjct 409982 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 410041
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| |||| || || || || || ||||| || ||||||||||||||||| ||
Sbjct 410042 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 410093
>seq28
Length=213702
Score = 89.7 bits (98), Expect = 3e-13
Identities = 161/235 (69%), Gaps = 8/235 (3%)
Strand=Plus/Plus
Query 33139 TTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATC 33198
|||||| ||||| | | || ||||| || | || || || ||||| |||||||||||
Sbjct 213418 TTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATC 213477
Query 33199 AGACAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGT 33254
||| | ||||| ||| |||| |||||| ||| || || |||||||||||||
Sbjct 213478 AGAAA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGT 213533
Query 33255 CCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
| | || || ||||| || || |||| ||| || | | ||| || || |
Sbjct 213534 CAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATG 213593
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || ||||| || || || || || ||||| || |||||||| |||||
Sbjct 213594 ACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213648
>seq33
Length=97263
Score = 82.4 bits (90), Expect = 5e-11
Identities = 136/196 (69%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 33182 TTTTGTATATTGTAATCAGACAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAA 33237
||||| || ||||||||||| | ||||| ||| |||| |||||| ||| |||
Sbjct 1 TTTTGGATGTTGTAATCAGAAA----GAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 56
Query 33238 TATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGT 33297
||||||||||||||||| | || || ||||| || || |||| ||| || |
Sbjct 57 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 116
Query 33298 TTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTAC 33357
| ||| ||||| | | || || ||||| || || || || || || ||||| ||
Sbjct 117 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 176
Query 33358 GAAAATTTGCATGTTT 33373
||||| ||||| |||
Sbjct 177 AAAAATCTGCATTTTT 192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318776982268782
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |