Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 1e-13 seq33 82.4 6e-11 >seq28 Length=213702 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 ||||| || || ||||| ||| ||||||||||| |||||||||| | || || Sbjct 213434 CTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCG 213493 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| |||||||| || | || ||||| ||||| || || | || ||||||| Sbjct 213494 TCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTG 213553 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 || ||| || |||| | || ||||| | ||||| ||| | || || Sbjct 213554 TCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATA 213613 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || ||||| || || ||||||||||| Sbjct 213614 GTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213648 >seq33 Length=97263 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 48539 TTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATT 48598 ||||| ||||||||||||| | || |||| ||||| |||||||| | ||||| Sbjct 1 TTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATT 60 Query 48599 AAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCT 48658 ||||| ||||| || || | || |||||| || ||| || |||| | | Sbjct 61 AAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCA 120 Query 48659 ATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAA 48718 || || || | |||||| ||| | || || || ||||| || || ||||| |||||| Sbjct 121 ATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAA 180 Query 48719 ATCTGCAT 48726 |||||||| Sbjct 181 ATCTGCAT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250383694159