Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq35 141 1e-29
seq22 132 8e-27
>seq35
Length=81692
Score = 141 bits (156), Expect = 1e-29
Identities = 196/269 (73%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | |||| |||| |||| ||||| ||||| ||||| ||||||||||
Sbjct 14957 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTA 15015
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| || || ||| | |||| || | ||||| |||
Sbjct 15016 TCAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCTGCTTTAATTTATGAGGAGG 15075
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACC 16609
|||| | ||||||||||| ||| | | | ||| ||| |||||| || || || ||
Sbjct 15076 TTCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACT 15134
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|||||||| || | ||||| || || || ||||| | |||||||| |||| | |||
Sbjct 15135 GAGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTTGTCTATGCCCTGAAGAGACAA 15194
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|| |||| | |||||||| ||| ||||
Sbjct 15195 GGACGTACTTTGTATGGTTTCGGAGGTTA 15223
>seq22
Length=382936
Score = 132 bits (146), Expect = 8e-27
Identities = 191/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| |||| |||| ||||| ||||| ||||| |||||||||||
Sbjct 380872 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 380930
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| || |||||| | || | ||| |||| ||||| |
Sbjct 380931 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 380990
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| ||| | ||| ||| || |||||| | || || ||
Sbjct 380991 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTCATTAGAGATGCTGTTACTTACACTGA 381050
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | |||||||| || || ||||| ||||||| || |||||| | |||||
Sbjct 381051 GCATGCCAAGAGAAAGACTGTTACTTCTCTGGATGTCGTCTACGCTTTGAAAAGACAAGG 381110
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| | |||||||| ||| ||||
Sbjct 381111 ACGTACCTTGTATGGTTTCGGAGGTTA 381137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075054625187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |