Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq16 167 6e-36 >seq16 Length=271151 Score = 167 bits (184), Expect = 6e-36 Identities = 771/1203 (64%), Gaps = 34/1203 (3%) Strand=Plus/Plus Query 363380 AGTATGA-TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGG 363437 ||||| | || ||| |||| ||||| |||| | ||| ||||| ||| | || ||||| Sbjct 181475 AGTATAACTACTTT-GGATTCAAGACCTTGGAAAGATCTTACCT-TCTGAGAATTAATGG 181532 Query 363438 TGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497 | || ||| ||||| || || || || | |||||||||||||| || || ||| | Sbjct 181533 TAATGTTGCAGAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGA 181592 Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACG 363556 || ||| | |||||||| ||||| || | ||| | ||| ||||| || | Sbjct 181593 TGACATTGCAAGAGTTATTGAAACTTATAACTTTATGAGT-CAGAAGTATTTCACTCATG 181651 Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT- 363615 || | || || ||| || ||||| || | | | ||||| ||||| || || |||||| Sbjct 181652 CCTCTCCTACTCTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTA 181710 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 | ||| ||| || || || || || || | || || | ||| | |||||| | Sbjct 181711 GTTGCCATGCGGGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTA 181770 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAG 363734 || ||||| | ||| || ||||||||| | || || ||| |||||| ||||| | Sbjct 181771 ATCTCCAAAACTGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGA-TC 181829 Query 363735 TTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793 |||||| || || || ||| |||||||| | |||| ||| | | || || Sbjct 181830 CTACATTGCTGGTACTAACGG-TACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCA 181888 Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853 |||| ||||| | || || ||||| ||||| || || || || |||||| ||| Sbjct 181889 ACAACACTGCTCGTTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGT 181948 Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913 | | ||||| |||||||| || |||| || |||| | || || ||| || | Sbjct 181949 ACTTGGAGCCATGGCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTA 182008 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 ||||||| | | || | || | ||| || | ||| | |||| | || |||| Sbjct 182009 AAGAGGAGATCAGAGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGA 182068 Query 363974 AGCGCGTGGAGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 | | || || ||| | ||||| | || || | ||| ||| ||| || ||| Sbjct 182069 AAAGAGTAGA-ACAGAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTT 182127 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 |||| || | || || || | || | | ||||||| || ||| | |||| | Sbjct 182128 GCCGACGTCTATGGAGATGAATTTGAGGAATTGTACGAAAGATACGAA----AAGGAAGG 182183 Query 364093 GCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGAT 364148 | | |||||| || || || ||||| |||| |||||| | || | || | Sbjct 182184 TCGTGGAAGACAAACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAAC 182243 Query 364149 TGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCA 364208 || || || || || | ||| |||| || ||| | || ||| || | |||||| | Sbjct 182244 AGAAACTGGTACTCCATTCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAA 182303 Query 364209 GCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 | || | ||| ||| | ||||| || || ||| |||||||| | | || Sbjct 182304 GAACTTGGGTGTCATTAAATCCTCTAACCTTTGCTGTGAAATTGTTGAATACTCTTCCCC 182363 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGA 364325 || |||||||| || |||||| | || || || || ||||| || ||||| || || Sbjct 182364 GGAAGAGACTGCTGTCTGTAACTTGGCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGA 182423 Query 364326 TGGTACT------TTTGACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376 || |||| | || || | | || |||| | ||| | | |||| | Sbjct 182424 TGATACTCACTGCTGGTACAACTTTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCG 182483 Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 || | ||| ||||||||| |||| ||| || |||| ||||| | | || || Sbjct 182484 TAACTTGAACAGAATTATCGACAGAAATTTTTACCCCGTTCCAGAAGCTAGGAGATCGAA 182543 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||||| || | || || | | | ||||| || || | ||||| | |||||||| | | Sbjct 182544 TATGCGTAATAGACCTATAGCTGTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTT 182603 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | || | |||||||| || || || || |||| |||| |||||||| || Sbjct 182604 GAGAATTCCTTTTGATTCTCCAGAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTAT 182663 Query 364557 GTA 364559 || Sbjct 182664 CTA 182666 Score = 84.2 bits (92), Expect = 6e-11 Identities = 224/337 (66%), Gaps = 8/337 (2%) Strand=Plus/Plus Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || |||||||| ||||| ||| | || || || || |||||||||| |||||||| | Sbjct 182860 CCTATGCCCACTGCTTCAACTTCCCAAATTCTGGGTTACAACGAGTGTTTCGAACCTTAC 182919 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || ||| | || |||||||| || | | |||||||||| | |||||| ||| Sbjct 182920 ACTTCCAACATCTACTCACGCCGTGTATTAGCTGGAGAATTTCAAATTGTTAATCCTTAC 182979 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || | ||||| || || || |||| || | |||||| || ||||||| Sbjct 182980 TTATTGCGTGATCTAGTGGATTTGGGTCTTTGGGACGATAACATGAAAAATCATATCATT 183039 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA--GCCTATTT 364990 | | || || ||| | || || | || | || || | || || |||| || Sbjct 183040 TCAGACAACGGCTCTATTCAAAATTTGCCCAACATACCTGAGCAACTTAAAGGCCT--TT 183097 Query 364991 ACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 |||| || || ||||| ||||| || || || | ||||||||||| |||||| | Sbjct 183098 ACAAGACTGTTTGGGAGATTTCTCAAAAGA-CTATTATTGATATGGCTGCCGATAGATCA 183156 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 || | |||| ||| |||||||| ||| ||||| Sbjct 183157 GCCTATATCGATCAATCTCAGTCGTTGAAC--ATTCA 183191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350944824338