Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 109 5e-19 seq12 93.3 4e-14 seq33 91.5 1e-13 seq28 87.8 2e-12 >seq4 Length=641805 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| || ||| | ||||| | ||| ||||| | | Sbjct 409897 GACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCA 409956 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||||||||| ||||| || || || ||||| ||| | || | || | Sbjct 409957 AAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTGAC 410015 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| ||||||||||| | || | || ||||| || || || | Sbjct 410016 GTTG-TCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCT 410074 Query 138599 TTACAAAAATCTGCAT 138614 |||| ||||| ||||| Sbjct 410075 TTACGAAAATTTGCAT 410090 >seq12 Length=648601 Score = 93.3 bits (102), Expect = 4e-14 Identities = 173/250 (69%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || ||| | || | | |||||||| || ||||||||||| | Sbjct 86184 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 86125 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| ||||| | | | || | ||| |||||||| ||||| Sbjct 86124 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 86065 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || |||| || | |||||||| ||||| | Sbjct 86064 ATTCCTTCCTTGTC-TTGAATCTTGGACTTGACATTG-TCGATGGTGTCGGAGGACTCGA 86007 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA----TGGCTTAT 138621 | || | || | || ||||| || | || || || |||||||||| || ||| | Sbjct 86006 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTTTT 85947 Query 138622 AATATTATTC 138631 ||| ||| || Sbjct 85946 AATGTTAGTC 85937 >seq33 Length=97263 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 138427 TTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATT 138486 ||||| |||||||| || | ||| | ||| || ||||| ||||| | | | ||| Sbjct 1 TTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATT 60 Query 138487 AGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TC 138545 | ||| || ||||| ||||| |||||||| || || ||| | || | ||| | | || Sbjct 61 AAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCT-TGAATCTTGGATTTGACATTATC 119 Query 138546 CACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | ||||| | ||||||||||| | || | || ||||| || || ||||| ||||| Sbjct 120 AATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAA 179 Query 138606 AATCTGCAT 138614 ||||||||| Sbjct 180 AATCTGCAT 188 >seq28 Length=213702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||| ||||| || | ||| | ||| || ||||| ||||| | Sbjct 213455 GATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCG 213514 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| | ||| || ||||| ||||| |||||||| ||||| ||| | || | ||| | Sbjct 213515 AAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTC-TTGAATCTTAGATTTGAC 213573 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || || | ||||| ||||| | || | || |||||||| ||||| || Sbjct 213574 GTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTT 213633 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 213634 GACGAAAATCTGCAT 213648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261413678480