Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 226 1e-53 seq28 179 1e-39 seq26 149 2e-30 seq33 145 3e-29 seq12 127 8e-24 seq4 104 9e-17 >seq1 Length=563119 Score = 226 bits (250), Expect = 1e-53 Identities = 863/1325 (65%), Gaps = 51/1325 (4%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| |||| ||||| | | ||| ||||| ||||| ||| || ||||| Sbjct 288032 GGAAAGCCTAATATCCAAGTCGAATTTAAGGGTGAGACTAAGGTTTTCAGCCCCGAAGAG 288091 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || |||||||| || |||||||| || || || || || ||| | ||| | Sbjct 288092 ATTTCCTCCATGGTTCTAACAAAAATGAAGGATACTGCTGAGCAGTATTTGGGTGAGAAA 288151 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 | | |||||||| | |||||||| ||||| |||||||| | ||| | ||||| || Sbjct 288152 ATCAACGATGCAGTTGTCACTGTTCCTGCTTACTTCAATGACTCTCAAAGACAAGCCACC 288211 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || ||||||||||| || |||| |||| |||||||| || || || Sbjct 288212 AAGGATGCTGGTTTGATTGCTGGTTTGAACGTTCAAAGAATCATTAATGAGCCCACCGCT 288271 Query 451433 GCTGCTCTAGCATA-----TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTT 451487 || || | || || ||||| || | || | | || | || | || ||| Sbjct 288272 GCCGCAATTGCTTACGGGTTGGACAAGAAGGAT-GCAGGCCAC-GGTGAGCACAACATTC 288329 Query 451488 TAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGG 451547 || | || ||| | |||||||||||| ||| |||| |||| || ||||| || ||| Sbjct 288330 TAATCTTCGATCTAGGTGGAGGAACTTTCGATGTTTCTCTACTATCTATTGATGA--GGG 288387 Query 451548 TATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||||| ||||| ||||| ||| ||||| || || | || ||||| || | ||||| Sbjct 288388 TATTTTCGAAGTCAAGGCCACCGCAGGTGACACCCACTTGGGTGGTGAGGACTTCGATAA 288447 Query 451606 TGCAATTGTGGAATGGTTGAAAACTGATGTTCAA-CGAAA-ACTAAAAGTAGATATTTCT 451663 | | || | || | | || |||||| |||| || || | |||| ||||| Sbjct 288448 CAGATTAGTCAACCACTTTATCGCCGA-GTTCAAGAGAAAGACCAAGA-AAGATCTTTCT 288505 Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAAC-----ATCAGCAGAAAAAGCTAAAATTA 451718 || ||||| | | | |||||| | || | ||| | ||| |||| || || Sbjct 288506 ACAAACCAGAGATCCCTTAGAAGACTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTG 288565 Query 451719 CACTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATT 451778 || ||| | || || || || | |||||| ||| | || || || || Sbjct 288566 TCTTC--TTCTGCTCAGAC--CT-CCATCGAGATTGATTCTTTGTTCGAGGGTATCGA-- 288618 Query 451779 ATGCTACTACTC--TTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACG 451836 | |||| ||| | || | |||| ||| || | ||| || | || | || Sbjct 288619 CTTCTACACCTCGATCACTAGAGCTAGATTCGAGGAGCTCTGTGCC--GACTTGTTCAGA 288676 Query 451837 GGTA--ATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATT 451894 | || | |||||||| ||| || | || || || | ||| | || || Sbjct 288677 TCCACCATCGAGCCTGTTGAGAGAGTCTTGAAAGACTCCAAGTTGGACAAATCTCAAGTT 288736 Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954 |||| ||||| | || || |||||||| ||||||| || ||| ||| || | || | Sbjct 288737 CATGAGATTGTTTTGGTTGGTGGTTCTACCAGAATTCCAAAGGTTC-AGAAAT-TAGT-T 288793 Query 451955 TCTTA-TTTTGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 ||| | |||| | || || | | | ||| | | || || || ||||| |||||| Sbjct 288794 TCTGACTTTTTCAATGGTAAGGAGCCAAACAAGTCCATCAACCCAGACGAAGCCGTTGCA 288853 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA---TGATGAAAAATTAGGA 452068 ||||||||||| || |||||||||||| | | || ||| | | || | | Sbjct 288854 TATGGTGCTGCTGTCCAAGCAGCTATTTTGTCTGG---AGATACTTCTTCCAAGACACAA 288910 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 || | | || | ||||| | ||||||||| | || ||||||| |||||||| || Sbjct 288911 GACTTGTTATTGCTGGATGTTGCTCCTCTATCTTTGGGTATTGAAACCGCTGGTGGTATC 288970 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTC-TATTCCTTGTAAAAAGAGTC--AAACATTT 452185 ||||| || | || | || |||| | | ||| | |||| |||| ||| ||| Sbjct 288971 ATGACCAAGCTGAT--CCCAAGAAACTCCACAATCCCAGCCAAAA-AGTCAGAAATCTTT 289027 Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| ||| |||||||||||||| |||||||| |||||||| || | | Sbjct 289028 TCGACATATGCTGACAACCAACCAGGTGTTTTGATTCAAGTCTTTGAAGGTGAGAGAACT 289087 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 | || || || || | || | ||| ||||| ||||||||| ||| Sbjct 289088 AGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAACTTTCTGGTATTCCTCCTGCTCCA 289147 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || |||||||||||| | |||| ||| | ||||| || |||||| | ||||| Sbjct 289148 AGAGGTGTTCCTCAAATTGAGGTCACCTTCGATATGGATGCCAACGGTATTTTGAATGTA 289207 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425 ||| ||||| || | || || | |||| ||||| ||||| || ||||| Sbjct 289208 TCTGCTGTTGAGAAGGGTACCGGTAAGACTCAAAAGATTACTATTACCAACGATAAGGGA 289267 Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485 | || || || ||||| || || | |||||| |||||| ||||||||||||||||| Sbjct 289268 AGATTGTCCAAGGAAGACATCGAGAGAATGGTTTCTGAAGCTGAAAAATTCAAGGATGAA 289327 Query 452486 GATGA 452490 || || Sbjct 289328 GACGA 289332 Score = 84.2 bits (92), Expect = 9e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 163325 AAAAAGTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATC 163384 ||| ||| |||||||||| ||||||||| ||||| | ||| ||| || ||| |||| Sbjct 313809 AAAGAGTGGGAAATTTTAGAATAGAACCACCTGGACTCTTTAGAGGAAGGGGTAGTCATC 313750 Query 163385 CAAAAATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATA 163444 | || | || | | ||| | |||||||||||| |||||||| | ||| || || | Sbjct 313749 CGAAGACTGGCAGAGTGAAGAAAAGAATATATCCCGAAGATGTAAGTTTGAACTTGAGTG 313690 Query 163445 AAAATGCACCTATTCC 163460 || |||| || ||||| Sbjct 313689 AAGATGCTCCAATTCC 313674 >seq28 Length=213702 Score = 179 bits (198), Expect = 1e-39 Identities = 174/224 (78%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || |||||||| ||||| |||||||| || || ||||| Sbjct 213648 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213589 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | ||| || |||||||| |||||||| ||||||||||| || Sbjct 213588 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 213529 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || ||||| ||||| || |||||| | | ||||| ||| Sbjct 213528 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 213469 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||| ||||||||||| ||||| Sbjct 213468 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGAGG 213425 >seq26 Length=437960 Score = 149 bits (164), Expect = 2e-30 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| | |||||||| | | |||||||| ||||| || |||| ||||| Sbjct 346019 GGAAAGCCAAACATTCAAGTTGAATTCAAAGGTGAGACTAAGGTCTTCACTCCAGAAGAG 346078 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || |||||| | || || ||||| || || || || |||| ||||| Sbjct 346079 ATCTCTTCCATGGTTTTGACCAAGATGAAGGACACTGCTGAGCAATTCCTTGGTGACAAG 346138 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||| ||||| || | ||||| || ||||| ||||| || | || | || || ||| Sbjct 346139 GTTAACGATGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACT 346198 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||||| || ||| | |||| || || || || || || Sbjct 346199 AAGGATGCTGGTCTCATTGCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCT 346258 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || | ||| || ||||| | || || || || | | Sbjct 346259 GCTGCCATTGCCTACGGTTT-GGACAA--AAAAGCTGAGGGTGAGAAGAACGTTCTGATC 346315 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || || || |||||||||||| ||| |||| | || || |||||||| || | || Sbjct 346316 TTCGACTTGGGTGGAGGAACTTTCGATGTTTCTTTGCTGTCCATTGAAGACGGTATTTTC 346375 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| || |||||| ||||| |||| ||||| || |||| || Sbjct 346376 GAGGTCAAGGCTACTGCTGGTGACACTCACTTAGGTGGTGAGGACTTTGACAA 346428 >seq33 Length=97263 Score = 145 bits (160), Expect = 3e-29 Identities = 142/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| |||||||| || || ||||| ||||| |||||||| || || ||||| Sbjct 189 AATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 130 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| || ||||||||||||||||| ||||||||||| || Sbjct 129 AGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCA 70 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||||||||| | || || ||||| ||||| || |||||| | | ||||| || Sbjct 69 GCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAA 10 Query 391229 TAT 391231 || Sbjct 9 CAT 7 >seq12 Length=648601 Score = 127 bits (140), Expect = 8e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || | || ||||| |||||||| | || || || || || Sbjct 85957 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTC 86016 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | | || || |||||||| |||||||||||||||||||| || Sbjct 86017 CGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 86076 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| ||||| | || || ||||| ||||| || |||||| || | || || || Sbjct 86077 ACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAA 86136 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||| | || | ||| ||||||| Sbjct 86137 CATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGG 86181 >seq4 Length=641805 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || ||||| ||||| || | || || || || || Sbjct 410091 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 410032 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | || || ||||| || ||||| |||||||||||||| || Sbjct 410031 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 409972 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || ||| | || ||||| ||||||||| | || || || Sbjct 409971 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 409912 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || | ||| ||||||| Sbjct 409911 CATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGG 409867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714375091172