Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq31 149 5e-31
>seq31
Length=431246
Score = 149 bits (164), Expect = 5e-31
Identities = 391/585 (67%), Gaps = 24/585 (4%)
Strand=Plus/Minus
Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780
|| || || || |||||||||||||| | || | || || |||||||| || || |||
Sbjct 101440 TACCACGATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAA 101381
Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACA 43836
| || || ||| || || ||| | |||| | | | ||| | || ||||||
Sbjct 101380 ATAGACCTGGGTAAGGATTT-GCATGACTGGAATAATCGTATGAACGATAATGAAAAATT 101322
Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896
|| || || || | || || |||||||| ||||| || ||||||||||| ||
Sbjct 101321 CTTCATCTCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTT 101262
Query 43897 GGTTAGTCGGTTT--GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954
||| | ||| | || || |||||| | || |||||| ||| ||||| || ||
Sbjct 101261 GGTG-GAAAATTTCAGTGCT-GAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTC 101204
Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014
|| || || || || ||||| || || | ||| | ||||| ||||| ||||||
Sbjct 101203 CAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATC 101144
Query 44015 AAAGATGGGCACGAGAAGCATCGATT---GTTTAATGCGATAGAAACAGTACCTGCGATT 44071
|||||| || ||| | | ||| ||| ||||| || || || | || ||
Sbjct 101143 AAAGATC--CAAAAGAGTC-TGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATC 101087
Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT------TTTGGA 44125
||| | || || ||||||||| | | |||||| ||| |||| | || |
Sbjct 101086 AAAGAAAAGGCTGACTGGGCCATGAGATGGAT---TTCTGATGACGATGCATTGTTCGCT 101030
Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185
||||| | || || || || | ||| || || || |||||||||||||| ||||| |
Sbjct 101029 GAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCT 100970
Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245
|| || ||||| ||||| ||||| | ||||| || ||||| || || |||||| | ||
Sbjct 100969 ATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATT 100910
Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290
| | || || || ||||| || |||||||||||| || ||
Sbjct 100909 TGCAGAGACGAGGGATTACACACTGACTTTGCTTGCTTGCTATTT 100865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455229804795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |