Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq33 127 1e-24
seq28 109 4e-19
seq12 109 4e-19
>seq33
Length=97263
Score = 127 bits (140), Expect = 1e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| ||||||||||| || || || || |||||||| || || || ||
Sbjct 191 AAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCA 132
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| |||| ||| | ||| | || | || || || |||||| | || || ||
Sbjct 131 TCAGACACTATTGATAATGTCAAATCCAAGA-TTCAAGATAAGGAAGGTATTCCTCCTGA 73
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| || |||||||| ||||| || || ||||||||||||| | ||| | |||||
Sbjct 72 CCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTA 13
Query 23787 CAACATACAAAA 23798
|||||| |||||
Sbjct 12 CAACATCCAAAA 1
>seq28
Length=213702
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || || || || || |||||||| || || || || |
Sbjct 213648 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213589
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| ||| |||| | | ||| || ||| ||||| |||||| | || || || ||
Sbjct 213588 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 213529
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||||| || || || || || ||||||||||||| | ||| | ||||||||
Sbjct 213528 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 213469
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| ||||| || ||||| | || || || |||||
Sbjct 213468 ATTCAAAAGGAATCCACTCTTCACTTGGTATTAAG 213434
>seq12
Length=648601
Score = 109 bits (120), Expect = 4e-19
Identities = 168/236 (71%), Gaps = 3/236 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || ||| | || || || || || || | ||||| || |||
Sbjct 85955 AAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCC 86014
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | || | || ||||| ||||| | || || ||
Sbjct 86015 TCCGACACCATCGACAATGTCAAGTCCAAGA-TTCAAGACAAGGAAGGAATTCCTCCTGA 86073
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||| ||||| || ||||| || || ||||||||||||| | ||| | || ||
Sbjct 86074 CCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTA 86133
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
|||||| || || ||||| || || || | ||| | || ||| |||| || ||||
Sbjct 86134 CAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCA 86189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008945000772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |