Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq28 152 1e-31
seq33 138 3e-27
seq4 129 1e-24
seq12 125 2e-23
>seq28
Length=213702
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||||| || || || || ||||| || ||||| || |||||
Sbjct 213645 CAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCAGAT 213586
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 213585 ACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAA 213526
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || || |||||| | ||||| || |
Sbjct 213525 CGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAATATT 213466
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || || ||||| |||
Sbjct 213465 CAAAAGGAATCCACTCTTCACTTGGTATTAAGACTTAGA 213427
>seq33
Length=97263
Score = 138 bits (152), Expect = 3e-27
Identities = 148/196 (76%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
|||||| | || ||||| || ||||| || ||||| || || ||||| || |||||||
Sbjct 196 TTAAAAAAATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGG 137
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
| |||||||| || || || |||||| |||||||| || || ||||| || ||||
Sbjct 136 AGTCATCAGACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTC 77
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| ||||||||||| | || || || || || || || ||||| || || |||||| | |
Sbjct 76 CTGACCAGCAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTG 17
Query 178093 ATTATAACGTCCAAAA 178108
|||| ||| |||||||
Sbjct 16 ATTACAACATCCAAAA 1
>seq4
Length=641805
Score = 129 bits (142), Expect = 1e-24
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| || || || || || || || |||||| | ||||||||
Sbjct 410093 AAAATGC---AAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAG 410037
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||| || || |||||||| |||||||||||||| || ||||| |||||
Sbjct 410036 TCTTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCT 409977
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| || || || ||||| || || || || | || ||||| || ||| | | ||
Sbjct 409976 GACCAACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGAC 409917
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| ||||||| || || || |||| ||||
Sbjct 409916 TACAACATCCAAAAGGAGTCTACTTTGCA-CTTG 409884
>seq12
Length=648601
Score = 125 bits (138), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| || || | || || || || || ||| | || || ||
Sbjct 85955 AAAATGC---AGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAG 86011
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 86012 TCCTCCGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCT 86071
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||| ||||| | || || || || || || || ||||| || || ||||| | ||
Sbjct 86072 GACCAACAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGAC 86131
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| |||| || || || || |||| || ||| ||||| | |||
Sbjct 86132 TACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGA 86179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728747773846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |