Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08]
164 sequences; 9,359,670 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq25 336 3e-87
seq22 158 1e-33
>seq25
Length=524034
Score = 336 bits (372), Expect = 3e-87
Identities = 1320/2073 (64%), Gaps = 37/2073 (2%)
Strand=Plus/Minus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 306089 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 306030
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || |||| || |||| || ||||| |||||||| || | ||| | | |
Sbjct 306029 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 305970
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 305969 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 305910
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 305909 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 305850
Query 53037 CTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
|| || | ||| | ||| |||||||| || ||| || || ||| || |
Sbjct 305849 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 305790
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 305789 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 305730
Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213
|||||||||||| ||||| | || | ||| || || || || ||||| | | |||
Sbjct 305729 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 305670
Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273
| || | |||| |||||| | |||||| ||||| ||||||||||| || | || |
Sbjct 305669 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 305610
Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333
|||| | ||| | || || |||| || | |||||| | ||| || || || |
Sbjct 305609 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 305550
Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 53393
| ||| | ||| || | | || || ||| | |
Sbjct 305549 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 305490
Query 53394 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 53453
| ||||| | |||||| | | |||| ||| || || || || | | || |
Sbjct 305489 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 305430
Query 53454 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 53513
| ||||| || |||| |||| || | || ||||| | |||||| ||| | |
Sbjct 305429 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 305370
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 305369 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 305310
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
| || | ||||||||||| || ||| |||| | || |||||| | || | ||| |
Sbjct 305309 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 305250
Query 53634 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT--------CAAATTGTC-CAT 53684
|| |||||| | || | ||| || ||| | || || |||
Sbjct 305249 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 305190
Query 53685 CTATTACAAACATG--TTCAAT-GCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| || ||| | | | || |||||||| |||| ||||| || || ||| | |
Sbjct 305189 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 305130
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
| |||| | || ||| |||||| ||| | || ||| || || || |
Sbjct 305129 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 305070
Query 53802 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAA 53861
|| ||| | ||||||||||| ||||||||||| || |||||||| |||||||||||
Sbjct 305069 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 305010
Query 53862 TCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCT 53921
| || | || | || || | ||| | | || || || | ||||| | |
Sbjct 305009 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 304954
Query 53922 T----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977
||| |||||||| | |||||| ||||| || ||||| | || | | |
Sbjct 304953 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 304894
Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037
| |||||| |||| ||| | | || | ||| || || | | | |||| ||||
Sbjct 304893 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 304834
Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097
|| || |||||||| ||||| | ||| |||| ||||| | ||| ||||| ||
Sbjct 304833 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 304774
Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157
|| ||||| || ||| | ||| || | || || | |||||| || ||||||||
Sbjct 304773 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 304714
Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217
| | | | ||||| |||||||| || || || || | || | ||| ||||| ||
Sbjct 304713 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 304654
Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277
| || |||| |||||||||||||||||| || | ||| || || || | || ||| |
Sbjct 304653 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 304594
Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337
|| |||||||||||||| ||| | ||| || || || || |||| ||||||||
Sbjct 304593 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 304534
Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397
|| ||| || || ||||| || ||||| || || |||||| |||| || ||
Sbjct 304533 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 304474
Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457
||||| |||||||| | || || || || ||||| | |||||||| || ||
Sbjct 304473 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 304414
Query 54458 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
|| || | || ||| |||| || || || || ||| || | || ||
Sbjct 304413 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 304358
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
|||||| || | || |||||||| | || ||| ||||| | ||| | | ||
Sbjct 304357 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 304298
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
|| ||| |||| | ||| ||| ||||||| || || || ||||| ||||| || |||
Sbjct 304297 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 304238
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 54693
||||| ||||| | |||| | ||||| || | ||| | ||| | || | | |
Sbjct 304237 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 304181
Query 54694 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750
| | | ||| |||| | ||||| ||||| || || || || |||| || | | |
Sbjct 304180 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 304121
Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810
|| || || | || | | || | || | || | |||||||| ||| || || ||
Sbjct 304120 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 304061
Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| || || | |||||||||||| || ||
Sbjct 304060 AATTCTTGCTGCCAAAATGGCATAATCGGGGTG 304028
>seq22
Length=274637
Score = 158 bits (174), Expect = 1e-33
Identities = 561/862 (65%), Gaps = 16/862 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| || | |||||||| || || |||||||| | || || || ||
Sbjct 215922 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215981
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| || |||||||| | || || || | |||| |||| | |
Sbjct 215982 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 216041
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 24022
| ||| || || || ||||| | ||| ||||| || ||||| || | ||||
Sbjct 216042 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 216101
Query 24023 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| | |||||||| | || ||| | | || ||| || ||| || ||||| ||||
Sbjct 216102 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 216159
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
| | || |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 216160 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 216219
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
| || ||||| ||||||||||| | ||| | || ||||| || || | || ||||
Sbjct 216220 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 216279
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || || | ||| || | ||| || || || ||||| ||||| |||||||| || || |
Sbjct 216280 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 216339
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 24317
| || || || ||||||| | | ||| | | || | || ||| ||||| |
Sbjct 216340 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 216399
Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 24377
| || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || ||
Sbjct 216400 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 216458
Query 24378 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 24435
| | || || |||||| | || |||||||||| || || || | || |
Sbjct 216459 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 216516
Query 24436 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 24495
| |||||||| || || || || || ||||| || ||| | || |||| || || |
Sbjct 216517 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 216576
Query 24496 CTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 24555
| || || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 216577 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 216636
Query 24556 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 24612
| || | || || || ||||||| | | || | | |||||||| ||||
Sbjct 216637 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 216696
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672
| ||| ||| | || | ||| || | |||||||| || || || |||| || |
Sbjct 216697 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 216756
Query 24673 ACATATTCCAGATGTCATGATA 24694
|||| | |||||| || || ||
Sbjct 216757 ACATTTGCCAGATATCGTGGTA 216778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720382870720
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |