Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08]
164 sequences; 9,359,670 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq25 224 9e-54
>seq25
Length=524034
Score = 224 bits (248), Expect = 9e-54
Identities = 1166/1833 (64%), Gaps = 53/1833 (3%)
Strand=Plus/Minus
Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894
|| ||||| ||||| |||| || |||| || ||||| ||||||||||||| |||
Sbjct 306039 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTA 305980
Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953
| || ||| ||| | | || ||| || ||| |||||| ||| | ||
Sbjct 305979 CCCATAGTTGGAGCCATC-AGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGA 305921
Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013
||| ||||| ||||| || | |||| |||||||| ||||||||||| || || || |
Sbjct 305920 TCTATCGGCAGCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAG 305861
Query 37014 TTGTTTTATATTATCTGGTAAAT---CTAAATGTTGAATAGAACCATTATGTAACACAAT 37070
||| | | || |||| | |||| ||||||||| || || | | | | ||
Sbjct 305860 GCCTTTAAGTTGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGAT 305801
Query 37071 TGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGG 37130
||| || |||| || | ||| | | | | ||| || | ||||| || ||
Sbjct 305800 ATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGG 305741
Query 37131 ATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGG 37190
||| |||| ||||| ||||||| |||||| | | || || || ||| ||| || ||
Sbjct 305740 ATTAACAATTTGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGG 305681
Query 37191 TTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT 37250
||| | |||| || | || | ||||| || || || ||||| ||||| ||||| |
Sbjct 305680 TTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAAC 305621
Query 37251 TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTT---TTTTAGTTCATTCCAATC 37307
||| | ||||| || || |||| | || |||| ||| ||| | ||| ||
Sbjct 305620 TAGCAACGAGTTTCTTAAACC-TGTGGA--AACAATCTTGGCTTTGAGTGATTCCCATTC 305564
Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367
||| | || | || ||||| ||||| |||||||| | ||| || | | |||||
Sbjct 305563 CCACAGCTCAGAGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGG 305504
Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA--GCTAGTTCGCAACTAGATTCT 37425
|||| | | | || || || | ||| | || | |||| |||| | |||
Sbjct 305503 AGAACCTTGGAAGGTTTCGTAGGCTCCTT--CTTCGACGGCTAATTCGTTGGAGGCTTCC 305446
Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTA 37485
| || |||| || || ||||| ||||| || ||||| | ||| |||||| |
Sbjct 305445 AAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAA 305386
Query 37486 TCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATG 37545
|| || | | | ||| ||||| ||||||| ||||| |||||||| | | ||||
Sbjct 305385 TCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATA 305326
Query 37546 GGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATT 37605
||||||| | |||| ||||| | |||| || || ||| |||| | || ||
Sbjct 305325 GGTCTATTACGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATA 305266
Query 37606 ATTTTATTTAGATTTTTAACTAGT----ATTTTCGTAATT--------ATTCTC-AACTT 37652
||| | || | || || ||| | ||| || ||| || || || ||
Sbjct 305265 ATTCTGTTCAAGTT----ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTT 305210
Query 37653 GT-CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGA 37707
|| | | || | | || | | | | |||||| || | || |||||| | |
Sbjct 305209 GTACCAGCAGTGAGTATCATCGGTTTCAACAAA--GGCTGGAAGAGCAATAGAAGCCAAG 305152
Query 37708 TTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTC 37767
||||| |||||| || || | | ||| | ||| || || || |||
Sbjct 305151 TTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAG 305092
Query 37768 GATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGT 37827
||| |||| ||||| || | || || | |||||| ||||||| ||| ||||| ||
Sbjct 305091 GATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGC 305032
Query 37828 ATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT-TGC 37886
|| | || || || |||| |||| ||||| | || | | ||| || ||| | ||
Sbjct 305031 ATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCA-AAGCTTTTGGGC 304973
Query 37887 TTTAACG--ATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAA 37944
||| | | | ||| | ||| | |||||||| | || |||| | |||
Sbjct 304972 TTTGATGGTTTGTCTTCCACGACCTTCCT--TTTCGTATCTTTCGTACAATTCCTCAAAT 304915
Query 37945 TCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCT 38004
|||| || | || ||| | || ||| ||| | |||| | | || | ||| ||
Sbjct 304914 TCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCG 304855
Query 38005 TCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCT 38064
||| | |||||| | || ||| || | |||||| | ||| || || | ||||| |||
Sbjct 304854 CCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCT 304795
Query 38065 TTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCA 38124
| | ||| || || || || ||||| | | | || | || || ||
Sbjct 304794 CTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCG 304735
Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184
|| |||||||| || | || | | | ||| || || | ||| | ||| || || | |
Sbjct 304734 GCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCA 304675
Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244
| ||| | | | ||||| || | | || | ||| || | |||||||| || | |||
Sbjct 304674 ACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCG 304615
Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCA 38304
|| |||| | || || | || | || || |||||| || ||| || ||||||
Sbjct 304614 TTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCA 304555
Query 38305 CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTG 38364
|| ||| ||| || |||||||| |||| || || ||||| | || ||||| || |
Sbjct 304554 CCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAG 304495
Query 38365 TCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTA 38424
|||||| || | | || ||||| |||||||| || || || || ||||||
Sbjct 304494 TCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTA 304435
Query 38425 AATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTA 38482
|| | |||||||| ||||| |||| || ||| ||| |||| ||||| ||||| |
Sbjct 304434 AACAGAGTAGGAGAGGCATGAGTGAA--ATACTTCTGACTCATAAAGTTATAAGTTTCAA 304377
Query 38483 TTACATCAT-CTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541
| || || | | || ||| | || ||||| || | || || | ||| | || |||||
Sbjct 304376 TAAC-TCTTGCAATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGA 304318
Query 38542 GGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATT 38601
|| | |||| | ||| ||| | | || || || ||| |||| || || || | |
Sbjct 304317 GGACGTTCTGCAACATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAAT 304258
Query 38602 CCAAAATAACTATA-TGAATAATCTCTATCGTA 38633
||||| || |||| |||| | |||||||||||
Sbjct 304257 CCAAAGTAGTTATACTGAA-AGTCTCTATCGTA 304226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468523839524160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |