Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq25 340 2e-88 seq22 172 7e-38 >seq25 Length=524034 Score = 340 bits (376), Expect = 2e-88 Identities = 1362/2142 (64%), Gaps = 37/2142 (2%) Strand=Plus/Minus Query 64828 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 64887 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 306089 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 306030 Query 64888 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 64947 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 306029 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 305970 Query 64948 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 65007 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 305969 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 305910 Query 65008 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 65067 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 305909 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 305850 Query 65068 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 305849 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 305790 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 305789 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 305730 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 |||||||||||| ||||| | || | ||| || || || || ||||| | | ||| Sbjct 305729 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 305670 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 305669 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 305610 Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 |||| | ||| | || || |||| || | |||||| | ||| || || || | Sbjct 305609 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 305550 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 65424 | ||| | ||| || | | || || ||| | | Sbjct 305549 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 305490 Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484 | ||||| | |||||| | | |||| ||| || || || || | | || | Sbjct 305489 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 305430 Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544 | ||||| || |||| |||| || | || ||||| | |||||| ||| | | Sbjct 305429 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 305370 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 305369 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 305310 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 305309 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 305250 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GC--------TCAT 65715 || |||||| | || | ||| || ||| | | | || |||| Sbjct 305249 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 305190 Query 65716 CTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 65772 | || ||| | | | || |||| ||| |||| ||||| || || ||| | | Sbjct 305189 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 305130 Query 65773 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 65832 | |||| | || ||| |||||| ||| | || ||| || || || | Sbjct 305129 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 305070 Query 65833 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 65892 || ||| | ||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 305069 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 305010 Query 65893 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 65952 | || | || | || || | ||| | | | || || || | ||||| | | Sbjct 305009 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 304954 Query 65953 T----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 66008 ||| |||||||| | |||||| || || || ||||| | || | | | Sbjct 304953 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 304894 Query 66009 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 66068 | |||||| |||| ||| | | || | ||| || || | | | |||| |||| Sbjct 304893 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 304834 Query 66069 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTT 66128 || || |||||||| ||||| | ||| ||||| ||||| | ||| ||||| || Sbjct 304833 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 304774 Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188 || ||||| || ||| | ||| || | || || |||||| || |||||||| Sbjct 304773 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 304714 Query 66189 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 66248 | || | | ||||| |||||||| || || || || | || | ||| ||||| || Sbjct 304713 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 304654 Query 66249 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 66308 | || |||| |||||||||||||||||| || ||||| || || || | || ||| | Sbjct 304653 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 304594 Query 66309 CCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 66368 || | |||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 304593 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 304534 Query 66369 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 66428 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 304533 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 304474 Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 304473 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 304414 Query 66489 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544 || || | || ||| |||| || || || |||||| || | || || Sbjct 304413 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 304358 Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 66604 |||||| || | || |||||||| | || ||| ||||| | ||| | | || Sbjct 304357 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 304298 Query 66605 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 66664 || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||| Sbjct 304297 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 304238 Query 66665 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 66724 ||||| ||||| | |||| | ||||| || | ||| | ||| | || | | | Sbjct 304237 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 304181 Query 66725 GGTAAT-ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 66781 | | | ||| |||| | ||||| ||||| || || || || |||| || | | Sbjct 304180 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 304121 Query 66782 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 66841 || || | | || | | || | || | || | |||||||| ||| || || || Sbjct 304120 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 304061 Query 66842 TATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 66901 ||||| || || | |||||||||||| || || || || | ||| || | || Sbjct 304060 AATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTC 304001 Query 66902 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || || || |||||| || || || ||||| || | ||| Sbjct 304000 AGCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 303959 >seq22 Length=274637 Score = 172 bits (190), Expect = 7e-38 Identities = 563/862 (65%), Gaps = 16/862 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||| || | |||||||| || || |||||||| | || || || || Sbjct 215922 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215981 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| || ||||||||| | || || || | ||||| |||| | | Sbjct 215982 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 216041 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 36045 | ||| || || || || || | ||| ||||| || ||||| || | |||| Sbjct 216042 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 216101 Query 36046 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 36104 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 216102 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 216159 Query 36105 TAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 216160 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 216219 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || ||||| ||||||||||| | ||| | || ||||| || || | || |||| Sbjct 216220 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 216279 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | || || | ||| || | ||| || || || ||||| ||||| |||||||| || || | Sbjct 216280 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 216339 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 36340 | || || || ||||||| | | || | | ||| ||||| ||||| | Sbjct 216340 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 216399 Query 36341 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 36400 | || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || || Sbjct 216400 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 216458 Query 36401 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 36458 | | || || |||||| | || |||||||||| || || || | || | Sbjct 216459 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 216516 Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518 | |||||||| || || || || || ||||| || ||| | || |||| || || | Sbjct 216517 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 216576 Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 36578 | || | || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 216577 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 216636 Query 36579 ACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCAT 36635 | || | || || || ||||||| || | || | | |||||||| |||| Sbjct 216637 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 216696 Query 36636 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 36695 | ||| ||| | || | ||| || | |||||||| || || || |||| || | Sbjct 216697 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 216756 Query 36696 ACATATTCCAGATGTCATGATA 36717 |||| | |||||| || || || Sbjct 216757 ACATTTGCCAGATATCGTGGTA 216778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171450745760