Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq84 1463 0.0 seq91 403 2e-107 seq139 179 4e-40 >seq84 Length=929 Score = 1463 bits (1622), Expect = 0.0 Identities = 872/929 (94%), Gaps = 0/929 (0%) Strand=Plus/Minus Query 8355 GGCCCCATTGGCGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGT 8414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 929 GGCCCCATTGGCGTGGAGCCCCGTTTAATTTTCGGGGGTGTTAGAGACAACCAGTGGAGT 870 Query 8415 CCGCTGCTGTCGGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGT 8474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 869 CCGCTGCTGTCGGCGTCCACTCTCTTTCCCCTTGTTACAAATAGAGTGTAACAACATGGT 810 Query 8475 TCACCTGTCTTGGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTA 8534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 809 TCACCTGTCTTGGTCCCTGCCTGGGACACATCTTAATAACCCCAGTATCATATTGCACTA 750 Query 8535 GGATTATGTGTTGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCT 8594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 749 GGATTATGTGTTGCCCATAGCCATAAATTCGTGTGAGATGGACATCCAGTCTTTACGGCT 690 Query 8595 TGTCCCCACCCCATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTA 8654 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 689 TGTCCCCACCCCATGGATTTCTATTGTTAAAGATATTCAGAATGTTTCATTCCTACACTA 630 Query 8655 GTATTTATTGCCCAAGGAGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCAC 8714 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 629 GTATTTATTGCCCAAGGGGTTTGTGAGGGTTATATTGGTGTCATAGCACAATGCCACCAC 570 Query 8715 TGAACCCCCCGTCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACC 8774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 TGAACCCCCCGTCCAAATTTTATTCTGGGGGCGTCACCTGAAACCTTGTTTTCGAGCACC 510 Query 8775 TCACATACACCTTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAAT 8834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 TCACATACACCTTACTGTTCACAACTCAGCAGTTATTCTATTAGCTAAACGAAGGAGAAT 450 Query 8835 GAAGAAGCAGGCGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGC 8894 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 449 GAAGAAGCAGGCGAAGATTCAGGAGAGTTCACTGCCCGCTCCTTGATCTTCAGCCACTGC 390 Query 8895 CCTTGTGACTAAAATGGTTCACTACCCTCGTGGAATCCTGATCCCATGTAAATAAAACCG 8954 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 389 CCTTGTGACTAAAATGGTTCACTACCCTCGTGGAATCCTGACCCCATGTAAATAAAACCG 330 Query 8955 TGACAGCTCATGGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATT 9014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 TGACAGCTCATGGGGTGGGAGATATCGCTGTTCCTTAGGACCCTTTTACTAACCCTAATT 270 Query 9015 CGATAGCATATGCTTCCCGTTGGGTAACATGTGCTATTGAATTAGGGTTAGTCTGNNNNN 9074 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 269 CGATAGCATATGCTTCCCGTTGGGTAACATATGCTATTGAATTAGGGTTAGTCTGGATAG 210 Query 9075 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGGGGCCTTATA 9134 | |||||||||||||| Sbjct 209 TATATACTACTACCCGGGAAGCATATGCTACCCGTTTAGGGTTAACAAGGGGGCCTTATA 150 Query 9135 AACACTCTTGCTAACGCCCTCTTGAGGGTCCGCTTATCGGTAGCTACACAGGCCCCTCTG 9194 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 149 AACACTATTGCTAATGCCCTCTTGAGGGTCCGCTTATCGGTAGCTACACAGGCCCCTCTG 90 Query 9195 ATTGACGTTGGTGTAGCCTCCCATAGTCTTCCTGGGCCCCTGGGAGGTACATGTCCCCCA 9254 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 89 ATTGACGTTGGTGTAGCCTCCCGTAGTCTTCCTGGGCCCCTGGGAGGTACATGTCCCCCA 30 Query 9255 GCATTGGTGTAAGAGCTTCAACCAAGAGT 9283 |||||||||||||||||||| |||||||| Sbjct 29 GCATTGGTGTAAGAGCTTCAGCCAAGAGT 1 >seq91 Length=385 Score = 403 bits (446), Expect = 2e-107 Identities = 229/233 (98%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 8014 ATCGCAACATTAGCCCACCGTGCTCTCAACGACCTCGTGAATATGAGGACCAACAACCCT 8073 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 233 ATGGCAACATTAGCCCACCGTGCTCTCAGCGACCTCGTGAATATGAGGACCAACAACCCT 174 Query 8074 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAACTTGTCTTCCAGATCGCAGCAATCGCGCC 8133 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 173 GTGCTTGGCGCTCAGGCGCAAGTGTGTGTAATTTGTCCTCCAGATCGCAGCAATCGCGCC 114 Query 8134 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 8193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113 CCTATCTTGGCCCGCCCACCTACTTATGCAGGTATTCCCCGGGGTGCCATTAGTGGTTTT 54 Query 8194 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTA 8246 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53 GTGGGCAAGTGGTTTGACCGCAGTGGTTAGCGGGGTTACAATCAGCCAAGTTA 1 >seq139 Length=143 Score = 179 bits (198), Expect = 4e-40 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 96108 GATCCTCACAGGCCGCACCCAGCTCTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 96167 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 102 GATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTG 43 Query 96168 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCC 96209 |||||||||||||||||||||||||||||||||||||||||| Sbjct 42 ACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552715666930560