Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08]
164 sequences; 9,359,670 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq12 136 4e-27
seq20 134 1e-26
seq110 100 3e-16
>seq12
Length=1006240
Score = 136 bits (150), Expect = 4e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || |||||||||| |||||||| | ||||| || || ||
Sbjct 543166 ATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTCC 543107
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| |||||||| ||||| || |||
Sbjct 543106 GACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCAA 543047
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| ||||| || || || ||||| || |||| |||| || || |||
Sbjct 543046 CAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAAC 542987
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
|| || ||||| || || | ||| |||| || ||||| | || || | |||||||
Sbjct 542986 ATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCATTGAGCCA 542927
>seq20
Length=311372
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| ||||||| ||||| ||||| ||||| || || || || || | |
Sbjct 214297 ATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATCA 214238
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| ||||| || ||||| || ||||| || ||
Sbjct 214237 GACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCAG 214178
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||| || ||||| || || || ||||| || |||| | || ||||| |||
Sbjct 214177 CAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAC 214118
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||||||||| || || ||||||||
Sbjct 214117 ATCCAAAAGGAATCCACCCTCCACTTGGT 214089
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || ||||| ||||| ||||| || || || ||||| | |
Sbjct 213613 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 213554
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| ||||| |||||||| ||||| || ||||| || ||
Sbjct 213553 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 213494
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| || || || || ||||| || |||| | || ||||| ||
Sbjct 213493 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 213434
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTT 24915
|||||||||||||| || || |||||||| ||
Sbjct 213433 ATTCAAAAGGAATCCACTCTTCACTTGGTATT 213402
Score = 129 bits (142), Expect = 5e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || ||||| |||||||| || || |||||| | |
Sbjct 214069 ATGCAGATCTTCGTCAAGACCTTGACAGGTAAGACTATTACCCTTGAGGTAGAATCGTCG 214010
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| | || ||| |||||||| ||||| || ||||| || ||
Sbjct 214009 GATACCATTGACAACGTTAAGTCTAA-GATTCAAGACAAGGAAGGTATTCCTCCTGACCA 213951
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||||||||||| || || || || |||| ||| |||| | || || || ||
Sbjct 213950 GCAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAA 213891
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915
||| ||||||||||| || || |||||||| ||
Sbjct 213890 CATCCAAAAGGAATCTACTCTCCACTTGGTTTT 213858
>seq110
Length=228
Score = 100 bits (110), Expect = 3e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| |||||||| ||||| || ||||| || || |||||||||||||| || || ||
Sbjct 15 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAGCAACGTTTGATCTTCGCTGGTAAG 74
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||| ||| |||| | || || || ||||| ||||||||||| || || |||
Sbjct 75 CAATTGGAAGATGGTAGAACTCTTTCTGACTACAACATCCAAAAGGAATCTACTCTCCAC 134
Query 24908 TTGGTGTT 24915
||||| ||
Sbjct 135 TTGGTTTT 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896677709920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |