Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq25 327 2e-84 seq22 212 9e-50 >seq25 Length=524034 Score = 327 bits (362), Expect = 2e-84 Identities = 1221/1901 (64%), Gaps = 41/1901 (2%) Strand=Plus/Minus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | |||||||||||||| | | || | || ||||| || |||||||||| Sbjct 306089 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 306030 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || || | ||| |||| || || || |||||||| || | ||| | ||| Sbjct 306029 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 305970 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 || | | ||||| |||| ||| ||| ||||||||| | ||| |||||| || | Sbjct 305969 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 305910 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | |||||| ||||||||| ||| ||||||| |||||| ||| ||| | | Sbjct 305909 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 305850 Query 68603 CATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 || || | | | | ||||||||| || || || || || || ||| || | Sbjct 305849 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 305790 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | ||| | ||| | ||| || | | | | | | |||||||| |||| Sbjct 305789 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 305730 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 ||||||| |||| ||| || | || | ||| || || || || ||||| | | | | Sbjct 305729 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 305670 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 | || | ||||||||||| | |||||| ||||| ||||||||||| || | || | Sbjct 305669 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 305610 Query 68840 TTCTAAGACCATGTGTTATGATT-TTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 |||| | ||| |||| | | | || |||| || || ||| ||||| || ||||| Sbjct 305609 TTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAG 305551 Query 68899 GGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATAT 68958 || | ||| | || ||||| | ||| || | | ||| || || | | Sbjct 305550 GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAG 305491 Query 68959 GTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAA 69018 ||||| || | |||||| | | |||| ||| || || || || | | || Sbjct 305490 GTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAG 305431 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 || ||||| ||||||| |||| || | || |||||| || ||| || ||| | | | Sbjct 305430 ATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCT 305372 Query 69079 AAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 || ||||| ||||| || || || ||||| || | | | |||||||||| | | | Sbjct 305371 CAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCAT 305312 Query 69138 ATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197 ||| || || ||||||||||| || ||| |||| | || |||||| | || | || Sbjct 305311 ATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTT 305252 Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAAC 69257 || || ||||| | || | || || ||| | | | | | || | Sbjct 305251 ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATC 305192 Query 69258 A--------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATT 69305 | |||| | | || || | ||| || | ||||| || || ||| | Sbjct 305191 ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTC 305132 Query 69306 AGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATT 69365 | | |||| | || || || || ||| |||| || |||| || Sbjct 305131 CGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTT 305072 Query 69366 TTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTC 69425 | ||| ||| | ||||||||||| || ||||| || || || || |||||||||||||| Sbjct 305071 CTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTC 305012 Query 69426 AATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA--- 69482 | || | || | || | | ||||| || || || ||| |||| Sbjct 305011 TGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT---GGT-TTGTCTTC 304956 Query 69483 -ACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539 ||| || ||||| ||| | ||| | || || ||||||||||| | || || Sbjct 304955 CACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGACGTC 304898 Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599 | | |||||| |||| ||||| | | || | ||| | ||| | | |||| Sbjct 304897 GGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCT 304838 Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||| || ||||| || ||||| | ||| || | ||||| | ||| | || || Sbjct 304837 TTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTC 304778 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 || || || || || ||| | || | | || || | ||||||||| || | Sbjct 304777 TTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAA 304718 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 || | || | | || || ||||| || || || || || | || | |||||||| Sbjct 304717 GTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTT 304658 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 || |||| |||| ||| |||||||||||||| || |||| || || |||| ||| || Sbjct 304657 GTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTA 304598 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 |||| | || ||||||||| ||| | ||| ||||| || || |||| ||||| Sbjct 304597 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGAT 304538 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959 || |||||| ||||| || || || || || || || ||||| |||| || Sbjct 304537 TAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAAC 304478 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 | ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 304477 TAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 304418 Query 70020 GTGAGTGAACCATTT----TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075 |||||||| | || ||| |||| || || ||||||||| || | | || | Sbjct 304417 ATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGT 304362 Query 70076 C-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134 | ||| |||||| || || || |||||||| | || || ||||| |||||| | Sbjct 304361 CATCAC-CATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACA 304303 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||| ||| ||| ||| ||||| ||| |||||| || || || ||||| ||||| || Sbjct 304302 TTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATAC 304243 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||||||||| ||||| | |||| |||| || || | ||| Sbjct 304242 TGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 304202 >seq22 Length=274637 Score = 212 bits (234), Expect = 9e-50 Identities = 565/854 (66%), Gaps = 12/854 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | || ||||| || || ||||| || |||| || || || Sbjct 215922 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215981 Query 39386 TCCATGAAATCAAACGGATTAGTTG-CATTATAtttttttttAAATCCTAATTCTGAAAT 39444 |||||||| ||||| ||||| |||| | || || ||||| || | || | Sbjct 215982 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 216040 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 | ||| || ||||| || || | || ||||| || ||||| || | | Sbjct 216041 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 216100 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || || ||||| || || | || ||||||||| || || |||||||| || || Sbjct 216101 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 216160 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | || | || ||||| | | || |||||| ||| | ||||| || || Sbjct 216161 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 216220 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||| |||| ||||| ||||| | ||| | || || || || || | || ||||| Sbjct 216221 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 216280 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 ||||| | ||| || | ||| || || | |||||||||||| ||||||||||| || || Sbjct 216281 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 216340 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA---TCATTATGTATCCACTT 39801 || || || || ||||| | | || || | || | |||| | ||||| | Sbjct 216341 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 216400 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||| ||||| || |||||| | ||| || || || || || ||||| || || Sbjct 216401 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGA 216459 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | || | |||||| | || ||||| || | || || | || || | Sbjct 216460 ATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGT 216519 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | ||||| || ||| ||||| || |||||||| ||| ||||||| | || ||| |||| Sbjct 216520 GAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCT 216579 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | | || || ||||| |||| |||||||| || || || ||| || ||||| || | Sbjct 216580 CAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 216639 Query 40041 CCAATACATGTTTA-ATAAAATATTTTTC---ATCGGGTGTCAATTTATTCCAGTCATTG 40096 | | || | | | || || ||||||| |||| | ||||||||||||| Sbjct 216640 CAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGC 216698 Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156 | ||| || | |||| ||| ||||| |||||||| || || || |||| |||||| Sbjct 216699 AAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTAC 216758 Query 40157 ATGTTCCATATATC 40170 || | ||| ||||| Sbjct 216759 ATTTGCCAGATATC 216772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907391836960