Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq20 179 8e-40 seq12 159 7e-34 seq3 156 9e-33 seq21 131 4e-25 seq110 114 3e-20 >seq20 Length=311372 Score = 179 bits (198), Expect = 8e-40 Identities = 155/192 (81%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || |||||||||||||||| ||| || | ||||| || ||||| || || ||||| Sbjct 213650 TTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAA 213709 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| |||||| || ||| |||||||| ||||||||||| ||||| | |||||| | Sbjct 213710 GATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTT 213769 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || ||||| |||||||| |||||||| || |||||||| || Sbjct 213770 GTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGAC 213829 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 213830 GAAAATCTGCAT 213841 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || || Sbjct 213878 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 213937 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||||||||| |||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 213938 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTT 213997 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || ||||| | ||| || || || || || |||||||| ||||| ||||| || Sbjct 213998 GTCAATGGTATCCGACGATTCTACCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGAC 214057 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 214058 GAAGATCTGCAT 214069 Score = 165 bits (182), Expect = 2e-35 Identities = 187/250 (75%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 282853 CCTAAAAAATAAAAC---GTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTT 282909 |||||| ||| ||| || |||||| | || | | ||||| || | ||| || Sbjct 213364 CCTAAACAATTGAACAAAGTTCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATT 213423 Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 | ||||| || ||||| |||| ||| || | || || || ||||| || || || |||| Sbjct 213424 CCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGA 213483 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||||||||| |||||| |||||||| ||||||||||| ||||| | ||| ||| ||| Sbjct 213484 TCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTAT 213543 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | ||||| || || | || || || |||||||| |||||||| || | |||||| |||| Sbjct 213544 CAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGA 213603 Query 283090 ATATCTGCAT 283099 | |||||||| Sbjct 213604 AAATCTGCAT 213613 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||||||||| |||| ||| || | || || || ||||| || || ||||| Sbjct 214106 TTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 214165 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || |||||||| |||||| |||||||| ||||| ||||| ||||| | ||| || | Sbjct 214166 AATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATT 214225 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| |||||||| || | || || || |||||||| |||||||| || | || ||||| Sbjct 214226 ATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAAC 214285 Query 283088 GAATATCTGCATTTT 283102 || ||||||||||| Sbjct 214286 AAAAATCTGCATTTT 214300 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 301477 CATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536 ||||||||| || || | | ||||||| |||| |||| ||||||| || ||||| Sbjct 259981 CATGGAGAATGCTTTGTCCTGAACGATGGTGGTGAAGTCGATTTGGATCTCGGAAACTAC 260040 Query 301537 GAACGTTTCACTTCATTAAC-CCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTT 301594 ||| | | | ||| || | || ||| | | || || |||| ||||| | || | Sbjct 260041 GAAAGAT--ATCTCAATATCACCCTAACCAGAGATCACAACATTACCACTGGTAAGGTCT 260098 Query 301595 ATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTG 301654 ||| ||| ||||||||||| ||| | | ||| |||||||||||| || || || |||| Sbjct 260099 ATTCAAAGGTTATCGAAAAGGAAAGAAACGGTGACTATCTCGGAAAAACTGTCCAGGTTG 260158 Query 301655 TTCCCCACATCACCGATG 301672 | || ||| | ||| ||| Sbjct 260159 TCCCTCACTTAACCAATG 260176 >seq12 Length=1006240 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || ||||| || || || || || |||||||||||||||| Sbjct 542939 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 542998 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | || || || ||||| || || ||||| |||||||||||||||||| || Sbjct 542999 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 543058 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | || || | ||||| ||||| || | ||||| Sbjct 543059 AATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGAC 543118 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| | || || |||||||| || || ||||| ||||| ||||||||||| Sbjct 543119 TTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543169 >seq3 Length=641798 Score = 156 bits (172), Expect = 9e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | ||| |||| || || || || ||||||||||||||||||| Sbjct 231944 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 231885 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||||| | ||| || || |||||||||| ||| ||||||||| || Sbjct 231884 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 231825 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | || |||||||| |||| || || Sbjct 231824 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 231765 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | ||||| |||||||| || | ||||| ||||| || |||||||| Sbjct 231764 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 231714 >seq21 Length=152177 Score = 131 bits (144), Expect = 4e-25 Identities = 184/256 (72%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 |||||||||||| | || |||| | ||| || || |||| ||| ||||| || || | Sbjct 48011 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 47952 Query 317007 AGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 |||| | | | | ||| | | ||||| || || | |||||||| |||| || |||| Sbjct 47951 AGTTCT-ACATTCATCTTGAGATGGGAAGCCCTCAACTTGACCGTTGGCAATAGCTCTCA 47893 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| |||||||| || || || || |||||||| || | | |||||| Sbjct 47892 TCAAAGTTGACTTACCAGCACCGTTAGGACCACAGAGACCATAACGTCTAGCTCTCTTCA 47833 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || | || |||||||| | |||||| |||| || ||||| ||||||||||| | Sbjct 47832 AACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGT 47773 Query 317186 CACACAGGTCCTCGCC 317201 ||| || || || || Sbjct 47772 TACATAGATCTTCACC 47757 >seq110 Length=228 Score = 114 bits (126), Expect = 3e-20 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| ||| || | ||||| || | ||| || || || || Sbjct 122 TTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 63 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025 |||||||||||| |||||| |||||||| ||||||||||| ||||| | |||||| Sbjct 62 GATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737000539256