Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08]
164 sequences; 9,359,670 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
seq12 91.5 1e-13
seq20 82.4 7e-11
>seq3
Length=641798
Score = 107 bits (118), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| || ||||| ||||| || | || | | || || | ||||| || || ||
Sbjct 231908 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAA 231849
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
||||| ||||||||||| | |||| | |||||||||| ||| | || | | |||
Sbjct 231848 GATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 231790
Query 41791 CGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| || ||||||| ||||||||||||| || || || ||||| || || |||||||
Sbjct 231789 TGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTA 231730
Query 41850 CGAAAATCTGCATGTT 41865
||||||| ||||| ||
Sbjct 231729 CGAAAATTTGCATTTT 231714
>seq12
Length=1006240
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| |||| || ||||||||| ||||| ||||| || || || | |||| ||
Sbjct 542958 ACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCC 543017
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| ||||| || || || |||| || |||||||| | |||| | |||||||| ||
Sbjct 543018 AGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCT-TG 543076
Query 41774 ATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
| | || | ||| || | ||| |||||| ||||| || |||| || || ||
Sbjct 543077 AATCTTGGACTTGACATTGTCGATG--GTGTCGGAGGACTCGACTTCCAAGGTAATAGTC 543134
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||| || | ||||| |||||||||||||| ||
Sbjct 543135 TTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 543169
>seq20
Length=311372
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709
||| |||| || || ||| ||||| ||||| || || || || || || | ||||
Sbjct 213401 TAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTC 213460
Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || ||||| || ||||| |||| || || ||||| | |||| | ||||||||
Sbjct 213461 TTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTC 213520
Query 41770 CATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
||| | || | || ||| || ||| || ||||| ||||| | || || |
Sbjct 213521 T-TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAG 213579
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||| || || ||||| ||||||||||||||
Sbjct 213580 TCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 213613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303052276800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |