Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08]
151 sequences; 9,357,640 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq12 405 7e-108
seq18 183 4e-41
>seq12
Length=271183
Score = 405 bits (448), Expect = 7e-108
Identities = 1376/2135 (64%), Gaps = 23/2135 (1%)
Strand=Plus/Plus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 87862 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87921
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || |||| || |||| || || || |||||||| || | ||| | | |
Sbjct 87922 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87981
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
|| | | || || |||| || ||| ||||||||| ||||| || || ||||
Sbjct 87982 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88041
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946
|||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| |
Sbjct 88042 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88101
Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
|| || | ||| | ||| ||||| || || |||| || || ||| || |
Sbjct 88102 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88161
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| | || | ||| | || || | | | | | | |||||||| | ||
Sbjct 88162 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88221
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
|||||||||||| ||||| | || | ||| || || || || ||||| | | |
Sbjct 88222 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88281
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
| || | |||| |||||| | |||||| || || ||||||||||| || | || |
Sbjct 88282 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88341
Query 79184 TTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACG 79243
|||| | ||| || || || |||| || |||||||| ||||| || ||||| |
Sbjct 88342 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88401
Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303
| | ||| | |||||||| | ||| || | | || || ||| | | |
Sbjct 88402 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88461
Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363
|||| || | |||||| | |||||||||| || || || ||| | | || |
Sbjct 88462 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88521
Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423
| ||||| ||||||| |||| || | || |||||| | |||||| ||| | |
Sbjct 88522 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88581
Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483
| ||||| || || ||||| ||||||||||| | | | |||||||||| | | |||
Sbjct 88582 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88641
Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543
| || | ||||||||||| || ||| |||| | || |||||| | || | || |
Sbjct 88642 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88701
Query 79544 TGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC---------CA 79593
|| || |||||| | || | || || ||| | | | | ||
Sbjct 88702 -GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCA 88760
Query 79594 TCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650
|| || ||| | | | || || | ||| |||| ||||| || || ||| |
Sbjct 88761 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCC 88820
Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710
| | |||| | |||||| ||| |||||| | |||||| || || ||
Sbjct 88821 GGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTC 88880
Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770
| || ||| | ||||||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct 88881 TTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCT 88940
Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCT 79829
| || | || | || || | ||| | | | || || || | | ||| |
Sbjct 88941 GTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGA 89000
Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
| || || |||||||| | || ||| || || || ||||| | || ||| | |
Sbjct 89001 CCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAG 89059
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|||||| ||| ||| | | || | ||| || |||| | | ||||| ||||||
Sbjct 89060 GCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCAT 89119
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|| |||||||| ||||| | ||| |||| ||||| | ||| |||||| || ||
Sbjct 89120 GAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACC 89179
Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069
||||| || ||| | ||| || | || || | |||||| || |||||||| |
Sbjct 89180 ATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAA 89239
Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129
|| | | || || |||||||| || || || || | || | ||| ||||| || |
Sbjct 89240 AGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAA 89299
Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189
|| |||| |||||||||||||||||| || ||||| || || || | || ||| |||
Sbjct 89300 GACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCC 89359
Query 80190 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 80249
|||||||||||||| ||| | ||| ||||| || || |||| |||||||| ||
Sbjct 89360 TGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGC 89419
Query 80250 GCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309
||| || || ||||| || ||||| || || ||||| |||| || || ||
Sbjct 89420 ACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAA 89479
Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369
||| |||||||| | || || || || ||||| | |||||||| || || ||
Sbjct 89480 ACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGT 89539
Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429
|| | || | | || | || || || |||||| || | | || || |||
Sbjct 89540 GAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATG 89599
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
||| || | || |||||||| | || ||| ||||| | ||| | | || ||| ||
Sbjct 89600 AATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAAT 89659
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
| ||| | ||||||| ||||||| || || || ||||| ||||| || ||||||||
Sbjct 89660 TCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCT 89719
Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT 80609
||||| | |||| | ||||| || | ||| | ||| | || | | |||
Sbjct 89720 ATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGTG-- 89777
Query 80610 ACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667
||| |||| | ||||| ||||| || || || || || | || | | || ||
Sbjct 89778 TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAACTCT 89837
Query 80668 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727
| | || | | || | || | || | ||||||| ||| || || || |||||
Sbjct 89838 TTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATTCTT 89897
Query 80728 GCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 80787
|| || |||||||||||||| || || || || | ||| || | || || ||
Sbjct 89898 GCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCAGCA 89957
Query 80788 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822
|| |||||| || || || ||||| || | |||
Sbjct 89958 AGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89992
>seq18
Length=305668
Score = 183 bits (202), Expect = 4e-41
Identities = 579/883 (66%), Gaps = 16/883 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 101031 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 101090
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| ||||| |||||| | || || || | ||||| |||| | |
Sbjct 101091 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 101150
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 49847
| ||| || || || || || | ||| ||||| || ||||| || | ||||
Sbjct 101151 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 101210
Query 49848 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906
| | |||||||| | || ||| | | || ||| || || || ||||| ||||
Sbjct 101211 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 101268
Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966
| | |||| |||| ||||| | | || |||||| ||| | ||| || || |
Sbjct 101269 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 101328
Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026
| || ||| | ||||||||||| | ||| || || ||||| || || | || ||||
Sbjct 101329 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 101388
Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086
| || || | ||| || | ||| || || || ||||| || || ||||||||||| || |
Sbjct 101389 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 101448
Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTC-TCCATAACTG--GCGCTGTCATGTATCCA-C 50142
| || || || |||||||| | | || | | | || || ||| ||||| |
Sbjct 101449 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 101508
Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202
| || ||||| || ||||| | ||| | ||| || || || || |||||||| || ||
Sbjct 101509 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 101567
Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 50260
| | || || |||||| | |||||||| |||| || || || | || |
Sbjct 101568 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 101625
Query 50261 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 50320
| |||||||| || || ||||| || ||||| || ||| | || |||| || || |
Sbjct 101626 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 101685
Query 50321 CTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 50380
| || | || || ||| | || |||||||| || || |||||| ||| ||||| |
Sbjct 101686 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 101745
Query 50381 ACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCAT 50437
| || | || || || |||||| | | | | || | |||||||| ||||
Sbjct 101746 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 101805
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497
| ||| ||| | |||| ||| || | |||||||| || || || |||| || |
Sbjct 101806 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 101865
Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|||| | |||||| || || || | | ||||| | |||||
Sbjct 101866 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 101908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267444267640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |