Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08]
151 sequences; 9,357,640 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq20 118 1e-21
seq14 107 2e-18
seq9 104 2e-17
>seq20
Length=311642
Score = 118 bits (130), Expect = 1e-21
Identities = 170/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || ||||||| || || |||||||| | ||||||||||||||| |
Sbjct 97771 AAAAATCTGCATACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGAT 97712
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || | ||| | ||| |||| || || || | ||||| || | |||
Sbjct 97711 GTTGTAGTCAGAAAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTG 97652
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| || |||||||||||||| ||||| | ||| || | ||| ||| | | | ||||||
Sbjct 97651 CTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTC 97592
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || |||| ||||| || || ||||| | ||| || || || ||||||||
Sbjct 97591 TGATGACTCCACTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97532
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| | |||||||| | || |||||||| || | ||| || ||
Sbjct 97986 CCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAA 97927
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| ||||| || || || ||||||| | | ||||||||| ||||||
Sbjct 97926 AGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGA 97867
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | ||| ||| | | | |||||| | || ||
Sbjct 97866 ATACCTTCCTTGTCTTGAATCTTAGACTTTACGTTGTCAATAGTGTCTGATGACTCCACT 97807
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || || ||||| | ||| || ||||| ||||||||
Sbjct 97806 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACAAAAATCTGCAT 97760
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || || |||||||| | ||| ||||||||||| | || |||||
Sbjct 98214 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 98155
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || ||||| || || || | ||||| || | |||||| || ||||||
Sbjct 98154 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 98095
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | |||||| | | ||| || | || ||
Sbjct 98094 ATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACC 98035
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || || ||||| ||||| || || || ||||||||
Sbjct 98034 TCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97988
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || || |||| | |||||||| | || ||||||||||| | ||| |||||
Sbjct 97302 CCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAA 97243
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || ||||| || || || |||| ||||| | |||||| || ||||||
Sbjct 97242 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGA 97183
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | ||| || | ||||| | | |||||| | || ||
Sbjct 97182 ATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACC 97123
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || || || || || ||||| ||||| ||||||||
Sbjct 97122 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 97076
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||||| || || |||||||| | ||||||||||||||| | ||| || ||
Sbjct 97530 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 97471
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || | ||||| || | |||||| || ||||||
Sbjct 97470 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 97411
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || | ||| ||| | | | || || | || ||
Sbjct 97410 ATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATGGTATCCGACGATTCTACC 97351
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || | || || || |||||||||||
Sbjct 97350 TCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCAT 97304
>seq14
Length=574533
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| | ||||||||||||||||| |||||||| | ||| || || |
Sbjct 231943 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 231884
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | |||||||| || || || ||||||| | | || || || ||||||
Sbjct 231883 AAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGA 231824
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | ||| || | ||||||| | | | |||||| | || ||
Sbjct 231823 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACC 231764
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || || ||||| || || || || || |||||
Sbjct 231763 TCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 231717
>seq9
Length=654414
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || |||| |||||||||||| ||||| || | ||| || || |
Sbjct 504332 CCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 504391
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || ||||| || || || |||| || || | ||| || || ||||||
Sbjct 504392 AGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGA 504451
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | ||| || | |||||| | ||| ||||| | | |||||
Sbjct 504452 ATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACT 504511
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | || || || || ||||||||
Sbjct 504512 TCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 504558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290353850360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |