Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08] 151 sequences; 9,357,640 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq42 141 1e-29 seq17 132 8e-27 >seq42 Length=75477 Score = 141 bits (156), Expect = 1e-29 Identities = 196/269 (73%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | |||| |||| |||| ||||| ||||| ||||| |||||||||| Sbjct 8604 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTA 8662 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| || || ||| | |||| || | ||||| ||| Sbjct 8663 TCAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCTGCTTTAATTTATGAGGAGG 8722 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACC 16609 |||| | ||||||||||| ||| | | | ||| ||| |||||| || || || || Sbjct 8723 TTCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACT 8781 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||||| || | ||||| || || || ||||| | |||||||| |||| | ||| Sbjct 8782 GAGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTTGTCTATGCCCTGAAGAGACAA 8841 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 || |||| | |||||||| ||| |||| Sbjct 8842 GGACGTACTTTGTATGGTTTCGGAGGTTA 8870 >seq17 Length=475501 Score = 132 bits (146), Expect = 8e-27 Identities = 191/267 (72%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||| ||||| ||||| ||||| ||||||||||| Sbjct 380872 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 380930 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| || |||||| | || | ||| |||| ||||| | Sbjct 380931 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 380990 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| ||| | ||| ||| || |||||| | || || || Sbjct 380991 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTCATTAGAGATGCTGTTACTTACACTGA 381050 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || | |||||||| || || ||||| ||||||| || |||||| | ||||| Sbjct 381051 GCATGCCAAGAGAAAGACTGTTACTTCTCTGGATGTCGTCTACGCTTTGAAAAGACAAGG 381110 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||| | |||||||| ||| |||| Sbjct 381111 ACGTACCTTGTATGGTTTCGGAGGTTA 381137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075061939643