Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08] 151 sequences; 9,357,640 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12 246 4e-60 >seq12 Length=271183 Score = 246 bits (272), Expect = 4e-60 Identities = 962/1498 (64%), Gaps = 41/1498 (3%) Strand=Plus/Plus Query 109725 AAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTC 109784 |||||| ||||| | | || || ||||||||| | ||||| |||||||||||||| Sbjct 88223 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 88282 Query 109785 ATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844 |||| || || ||||| | ||| ||||| |||||||| || || | || | ||| Sbjct 88283 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 88342 Query 109845 TCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGT----CCCAATCATAACGACCAC 109900 || | ||| | | || || || ||| || |||| || | || | Sbjct 88343 TCTTAAACCTGTGGAA---ACAATCTTG-GCTTTGAGTGATTCCCATTC----CCACAGC 88394 Query 109901 TAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAAC 109960 | | | || ||||||| || ||| | | |||| || || ||||||| Sbjct 88395 TCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAAC 88452 Query 109961 CCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCG 110020 | | ||| | ||||| | || || | |||| || ||| || || || | || | Sbjct 88453 CTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTG 88512 Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080 |||| || ||||| |||||||| ||| ||| | | | ||| | | || || | Sbjct 88513 CATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAG 88572 Query 110081 GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140 ||| | | ||||| |||| |||| ||| |||||||| | | | || || | || Sbjct 88573 GAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTAT 88632 Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCC 110197 ||| || || | | ||| |||| ||||||||||| || | |||||| | | Sbjct 88633 TACGCATATTCGATCTCCTAGC---TTCTGGAACGGGGTAAAAATTTCTGTCGATAATTC 88689 Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT- 110256 || | || || || || ||||||||||| || || || | | | || Sbjct 88690 TGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGC 88749 Query 110257 --TTCGTCTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAG 110311 | || || | | | ||| | || ||||||||||| || | || || |||| Sbjct 88750 AGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAG 88809 Query 110312 AAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGA 110371 |||||| || | | |||||| | |||||| || | ||| || ||||||| Sbjct 88810 CAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGA 88869 Query 110372 CACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGG 110431 |||||||||||||||| || | ||| ||| || ||||||||||| |||||| |||| | Sbjct 88870 CACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAG 88929 Query 110432 TACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491 |||||||||| || |||| || || ||||| | ||| | | ||| || ||| Sbjct 88930 TACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTT 88989 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 | | ||||||||| ||||| | |||||| ||||||||||| | ||| || | Sbjct 88990 GTCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGA 89049 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 | || | ||| || || | ||| |||| |||| ||||| ||| || || | Sbjct 89050 CGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTA 89109 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCC 110670 | || ||||||||||| ||||| ||||||| || | ||| | ||| | || || | Sbjct 89110 CTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TC 89168 Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730 || || | ||| ||||| || | || | ||| | | ||| || | |||||||| Sbjct 89169 TCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGC 89228 Query 110731 TCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGT 110784 || | || | ||| | || | | |||| ||| | |||| |||||| || Sbjct 89229 TCCAAGTACAAAGCAA---ATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGA 89285 Query 110785 GCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCC 110844 || ||| ||||||||||| | ||| |||||||| |||| || ||| || ||||| Sbjct 89286 GCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCA 89345 Query 110845 CTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCAC 110904 ||| ||| |||||||||| | || || |||| |||||| ||||| || Sbjct 89346 GCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTT 89405 Query 110905 TTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964 || ||| ||||| || | | ||| | ||||| || ||||| || || || Sbjct 89406 TTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGC 89465 Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024 |||||| || || || || ||||| || || |||| || || || || || || ||| Sbjct 89466 ATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTA 89525 Query 111025 GGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083 || | |||||| |||| | || | || ||| ||| || || || | | | Sbjct 89526 GGAGAGGCATGAGTGAA-ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGC 89584 Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143 | || | ||| ||||| || || ||||| ||||| | || | |||||| ||| Sbjct 89585 AATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGC 89644 Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 | || |||| || | | |||||||| |||| || | |||||||| |||||||| Sbjct 89645 AACATTACCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 89701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974888307800