Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08] 151 sequences; 9,357,640 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq20 122 6e-23 seq9 95.1 8e-15 seq14 84.2 1e-11 >seq20 Length=311642 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || || | || ||||| || || ||| || ||||| ||||||||||| || Sbjct 97303 ACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGA 97244 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || || |||||||| ||||| ||||| || | || Sbjct 97243 AAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGG 97184 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || | || |||| || | ||||| ||| |||| Sbjct 97183 AATACCTTCCTTATCTTGAATCTT-GGATTTGACATTATCAATAGTGTCTGATGACTCCA 97125 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || |||||||||| ||||| ||||| |||||||| Sbjct 97124 CCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCAT 97076 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| | ||| ||||| || ||||| || ||||| |||||||| || || Sbjct 97531 ACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 97472 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || |||||||| || || || || |||||||| ||||| || | || Sbjct 97471 AAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGG 97412 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | ||| | ||| | ||| || ||||| | Sbjct 97411 AATACCTTCCTTGTCTTGAATCTT-AGACTTAACGTTGTCAATGGTATCCGACGATTCTA 97353 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || |||||||| || || || || |||||||||||| Sbjct 97352 CCTCAAGGGTAATAGTCTTACCTGTCAAGGTCTTGACGAAGATCTGCATA 97303 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| | ||| ||||| || ||||| || ||||| |||||||| || || Sbjct 97759 ACCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 97700 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || |||||||| || || || || |||||||| ||||| || | || Sbjct 97699 AAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGG 97640 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | || | ||| | ||||| ||| |||| Sbjct 97639 AATACCTTCCTTGTCTTGAATCTT-AGACTTTACGTTGTCAATAGTGTCTGATGACTCCA 97581 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || ||||| ||||| || || || || ||||||||| Sbjct 97580 CTTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCATA 97531 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 33520 TCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCG 33579 ||||||||||| | | ||| ||||| || |||||| || ||||| || |||||||| Sbjct 98217 TCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCA 98158 Query 33580 GAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 || || || | |||| |||| ||| || || || || |||||||| ||||| || | Sbjct 98157 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 98098 Query 33640 GGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCC 33699 || | |||||| ||||| ||| || ||| | || | || || ||| || Sbjct 98097 GGAATACCTTCCTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCT 98038 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| ||||| || ||||| |||| || || || || ||||||||| Sbjct 98037 ACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCATA 97987 >seq9 Length=654414 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | | |||| || | ||| ||| || || |||||||| || || Sbjct 504331 ACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGA 504390 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || || |||||||||||||| || || || | || Sbjct 504391 CAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 504450 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || | | |||| ||| | ||||||| || || | Sbjct 504451 AATTCCTTCCTTGTCTTGAATCTT-GGACTTGACATTGTCGATGGTGTCGGAGGACTCGA 504509 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || ||||| ||||| || || || || |||||||| Sbjct 504510 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 504558 >seq14 Length=574533 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | | ||||| || | ||| ||| ||||| |||||||| || | Sbjct 231945 CACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAG 231886 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| |||| |||||| || || | | Sbjct 231885 ACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 231826 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| ||| || | | || | ||| | |||||| || ||| Sbjct 231825 GAATTCCCTCCTTGTCCTGAATCTT-GGACTTGACGTTGTCAATAGTGTCGGAAGACTCC 231767 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | || ||||| || || ||||| Sbjct 231766 ACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 231717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703395081920