Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08] 151 sequences; 9,357,640 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq20 134 9e-27 seq9 116 2e-21 seq14 100 2e-16 >seq20 Length=311642 Score = 134 bits (148), Expect = 9e-27 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| |||||||| ||||| ||||| ||||| |||| ||||||| Sbjct 97284 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 97225 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| |||||||| || ||||| || || | || ||||| ||| Sbjct 97224 AGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGA 97165 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | ||| || || ||| |||||| |||||| || | || || || || Sbjct 97164 ATCTTG-GATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGATAGTCTT 97106 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||| |||| ||||| |||||||||||||| || Sbjct 97105 ACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97073 Score = 125 bits (138), Expect = 4e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || || |||||||| | || ||||| || |||||| ||||||||||| || ||||| Sbjct 98217 TCACCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCA 98158 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 ||||| |||| ||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 98157 GAAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 98098 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTC 34655 || | || ||||||||| ||| || | ||| ||| || ||| || ||| ||| Sbjct 98097 GGAATACCTTCCTTGTCT-TGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTC 98039 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || ||||| |||| || || || ||||||||||| Sbjct 98038 TACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 97988 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| |||||||| |||||||| ||||| || || ||| Sbjct 97758 CCACCTCTCAGTCTTAAAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 97699 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| | ||| ||||| || || || ||||| || ||||| || || Sbjct 97698 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 97639 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| |||| || | ||| |||||| |||||| Sbjct 97638 ATACCTTCCTTGTCTTGAATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCAC 97580 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || ||||| ||||| || || || ||||||||||| Sbjct 97579 TTCAAGAGTGATAGTCTTACCAGTTAAAGTCTTGACGAAAATCTGCAT 97532 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| ||||| || ||||| || || ||||| |||| | ||||| Sbjct 97968 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCTACCATCTTCC 97909 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| ||||| ||||| || | ||| || || || || || | || ||||||||| Sbjct 97908 AGTTGCTTACCAGCAAAGATCAGACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 97849 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| |||| || | ||| |||||| ||||||||| | || || || || Sbjct 97848 ATCTTAGACTTTA-CGTTGTCAATAGTGTCTGATGACTCCACTTCAAGAGTGATAGTCTT 97790 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| || || |||||||||||||| Sbjct 97789 ACCAGTTAAAGTCTTGACAAAAATCTGCAT 97760 >seq9 Length=654414 Score = 116 bits (128), Expect = 2e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || || || |||| ||||||| ||||| ||||| ||||| Sbjct 504367 CTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 504426 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || ||||| |||||||| || || | ||| ||||||||| ||||| | || || Sbjct 504427 AATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGAATCTTG-GACTTGACAT 504485 Query 34635 TAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| ||||||| ||| || || ||||||||||| || || | Sbjct 504486 TGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGA 504545 Query 34694 CAAAAATCTGCATGTT 34709 | ||||||||||| || Sbjct 504546 CGAAAATCTGCATTTT 504561 >seq14 Length=574533 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || | ||| ||||||||| ||||| || || || | |||| | || || Sbjct 231925 ACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 231866 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||| ||||| ||||| || | |||||||||||| || || | |||||||||||| || Sbjct 231865 AATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTC-CTG 231807 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || | || ||| | ||| ||||| |||||| |||| ||| || || || Sbjct 231806 AATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTT 231747 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 |||||| | || || || ||||| ||||| ||| Sbjct 231746 ACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 231713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729020799183