Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016415.1_202016-02-08]
151 sequences; 9,357,640 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq20 154 1e-32
seq9 127 2e-24
seq14 116 3e-21
>seq20
Length=311642
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| |||| |||||||| ||||| | ||
Sbjct 97076 ATGCAGATTTTTGTTAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATCA 97135
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || |||||||| || ||||| || || || || ||
Sbjct 97136 GACACTATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGACCAG 97195
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | || || || ||| |||||||| || || |||| |||||||||
Sbjct 97196 CAACGTTTAATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAC 97255
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || ||| | || |||||| | | || ||||||| ||
Sbjct 97256 ATCCAAAAGGAATCCACCCTCCACTTGGTTCTAAGATTAAGGGGTGGTAT 97305
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | || || ||| |||| |||||||||||||| | ||
Sbjct 97532 ATGCAGATTTTCGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 97591
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||||||||| ||||| || || || || ||
Sbjct 97592 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 97651
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || ||||||||||| || || |||| || ||||||
Sbjct 97652 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 97711
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || |||||||| | || | ||||| ||
Sbjct 97712 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGGTGGTAT 97761
Score = 134 bits (148), Expect = 1e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || || ||| |||| |||||||| || || | ||
Sbjct 97988 ATGCAGATTTTCGTCAAGACTCTAACTGGTAAGACTATCACTCTTGAGGTAGAGTCATCA 98047
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | |||||| || ||||||||||| ||||| || || || || ||
Sbjct 98048 GATACTATTGATAACGTCAAATCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 98107
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || ||| |||||||| || || |||| ||||||||
Sbjct 98108 CAACGTTTGATCTTCGCTGGTAAGCAACTGGAAGACGGTAGAACTCTTTCTGATTACAAT 98167
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||||||||||| || || | || ||||| ||
Sbjct 98168 ATTCAAAAGGAATCCACTCTTCACTTGGTATT 98199
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || ||| ||||||| ||||| || ||| ||||
Sbjct 97304 ATGCAGATCTTCGTCAAGACCTTGACAGGTAAGACTATTACCCTTGAGGTAGAATCGTCG 97363
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || ||||||||||| ||||| || || || || ||
Sbjct 97364 GATACCATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 97423
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||| || || ||||||||||| || || |||| || ||||||
Sbjct 97424 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTCTTTCTGACTACAAC 97483
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || |||||||| | || | ||||| ||
Sbjct 97484 ATCCAAAAGGAATCTACTCTCCACTTGGTTTTAAGACTGAGAGGTGGTAT 97533
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| | || || ||| |||| |||||||||||||| | ||
Sbjct 97760 ATGCAGATTTTTGTCAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTGGAGTCATCA 97819
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||||||||| ||||| || || || |||||
Sbjct 97820 GACACTATTGACAACGTAAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 97879
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||| ||||||| || || |||| || ||||||
Sbjct 97880 CAACGTCTGATCTTTGCTGGTAAGCAACTGGAAGATGGTAGAACTCTTTCTGACTACAAC 97939
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || ||||| || ||| | || ||||||
Sbjct 97940 ATCCAGAAGGAATCCACCCTCCACTTGGTT 97969
>seq9
Length=654414
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || | ||||| ||| ||||||| | ||||| || | |||
Sbjct 504558 ATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACTATTACCTTGGAAGTCGAGTCCTCC 504499
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| ||||| || || || || |||
Sbjct 504498 GACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCAA 504439
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || || ||| |||||||| || || | || || ||||||
Sbjct 504438 CAACGTTTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACTCTGTCTGACTACAAC 504379
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || || || ||||| || | ||| | ||||| ||
Sbjct 504378 ATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTAT 504329
>seq14
Length=574533
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || ||||| || || ||||| ||| |||| || | || ||||| | |||
Sbjct 231717 ATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTCC 231776
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||| ||||| || || || || || || |||
Sbjct 231777 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCAA 231836
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || |||||||| || || || | || || ||||||
Sbjct 231837 CAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAAC 231896
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || || || ||||| | | ||| | |||||
Sbjct 231897 ATCCAAAAGGAGTCTACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 231943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917579091520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |