Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq20 136 8e-27
seq12 98.7 2e-15
>seq20
Length=435382
Score = 136 bits (150), Expect = 8e-27
Identities = 313/467 (67%), Gaps = 17/467 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| ||||| ||||| || ||||||||| || | || || || || ||||||
Sbjct 328947 GTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCTATCTTCTGG 329006
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| || ||| | |||| ||| | |||| |||||||||| | |||| || |||
Sbjct 329007 TTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAC 329066
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| || | || |||||||| ||| |||| || | | || | || |
Sbjct 329067 GAGGGATTACACACTGACTTTGCTTGCTTGCTATTT--------TCTCATTTAAACA--A 329116
Query 102098 TCAAG--AGAAAGGAT-TC-TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150
| || || |||| || |||||| || |||| || || ||| || ||| ||
Sbjct 329117 TAGAGCCAGTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAG 329176
Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210
| |||||| | || ||||| ||| |||| |||||||||| |||||| ||||
Sbjct 329177 GTACTTCACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCA 329236
Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270
||| |||| || || || || | |||| |||| | |||| ||||| || ||
Sbjct 329237 GTATGTTGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAA 329296
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| | ||| || || |||||||| || ||||| | | ||| |||||||| ||
Sbjct 329297 CGTCAACAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTT 329356
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377
||||||||||| | || || ||| || |||||||||||||
Sbjct 329357 CGAAAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 329403
>seq12
Length=271197
Score = 98.7 bits (108), Expect = 2e-15
Identities = 186/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829
|| ||||| ||| | || | ||| |||||||| |||||||| | || ||||| |
Sbjct 89385 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAA 89444
Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889
|||||| ||||| || ||||| ||||| | | | | | | ||| || || || |
Sbjct 89445 AGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACAT 89504
Query 94890 TTGGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948
||| || |||| | | ||| |||||||| || || || ||||| || ||||| | |
Sbjct 89505 TTGTGG-GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCT 89563
Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008
||| | | ||| |||||||| || | ||||| || |||||||||| ||
Sbjct 89564 GACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAG 89623
Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||||| || ||||| || ||
Sbjct 89624 CAACACGCATAATCAAGTGTTGAGGACGTTC 89654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582288328925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |