Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08] 135 sequences; 9,359,904 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq12 224 9e-54 >seq12 Length=271197 Score = 224 bits (248), Expect = 9e-54 Identities = 1166/1833 (64%), Gaps = 53/1833 (3%) Strand=Plus/Plus Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894 || ||||| ||||| |||| || |||| || ||||| ||||||||||||| ||| Sbjct 87925 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTA 87984 Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953 | || ||| ||| | | || ||| || ||| |||||| ||| | || Sbjct 87985 CCCATAGTTGGAGCCATC-AGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGA 88043 Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013 ||| ||||| ||||| || | |||| |||||||| ||||||||||| || || || | Sbjct 88044 TCTATCGGCAGCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAG 88103 Query 37014 TTGTTTTATATTATCTGGTAAAT---CTAAATGTTGAATAGAACCATTATGTAACACAAT 37070 ||| | | || |||| | |||| ||||||||| || || | | | | || Sbjct 88104 GCCTTTAAGTTGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGAT 88163 Query 37071 TGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGG 37130 ||| || |||| || | ||| | | | | ||| || | ||||| || || Sbjct 88164 ATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGG 88223 Query 37131 ATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGG 37190 ||| |||| ||||| ||||||| |||||| | | || || || ||| ||| || || Sbjct 88224 ATTAACAATTTGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGG 88283 Query 37191 TTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT 37250 ||| | |||| || | || | ||||| || || || ||||| ||||| ||||| | Sbjct 88284 TTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAAC 88343 Query 37251 TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTT---TTTTAGTTCATTCCAATC 37307 ||| | ||||| || || |||| | || |||| ||| ||| | ||| || Sbjct 88344 TAGCAACGAGTTTCTTAAACC-TGTGGA--AACAATCTTGGCTTTGAGTGATTCCCATTC 88400 Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367 ||| | || | || ||||| ||||| |||||||| | ||| || | | ||||| Sbjct 88401 CCACAGCTCAGAGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGG 88460 Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA--GCTAGTTCGCAACTAGATTCT 37425 |||| | | | || || || | ||| | || | |||| |||| | ||| Sbjct 88461 AGAACCTTGGAAGGTTTCGTAGGCTCCTT--CTTCGACGGCTAATTCGTTGGAGGCTTCC 88518 Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTA 37485 | || |||| || || ||||| ||||| || ||||| | ||| |||||| | Sbjct 88519 AAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAA 88578 Query 37486 TCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATG 37545 || || | | | ||| ||||| ||||||| ||||| |||||||| | | |||| Sbjct 88579 TCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATA 88638 Query 37546 GGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATT 37605 ||||||| | |||| ||||| | |||| || || ||| |||| | || || Sbjct 88639 GGTCTATTACGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATA 88698 Query 37606 ATTTTATTTAGATTTTTAACTAGT----ATTTTCGTAATT--------ATTCTC-AACTT 37652 ||| | || | || || ||| | ||| || ||| || || || || Sbjct 88699 ATTCTGTTCAAGTT----ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTT 88754 Query 37653 GT-CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGA 37707 || | | || | | || | | | | |||||| || | || |||||| | | Sbjct 88755 GTACCAGCAGTGAGTATCATCGGTTTCAACAAA--GGCTGGAAGAGCAATAGAAGCCAAG 88812 Query 37708 TTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTC 37767 ||||| |||||| || || | | ||| | ||| || || || ||| Sbjct 88813 TTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAG 88872 Query 37768 GATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGT 37827 ||| |||| ||||| || | || || | |||||| ||||||| ||| ||||| || Sbjct 88873 GATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGC 88932 Query 37828 ATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT-TGC 37886 || | || || || |||| |||| ||||| | || | | ||| || ||| | || Sbjct 88933 ATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCA-AAGCTTTTGGGC 88991 Query 37887 TTTAACG--ATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAA 37944 ||| | | | ||| | ||| | |||||||| | || |||| | ||| Sbjct 88992 TTTGATGGTTTGTCTTCCACGACCTTCCT--TTTCGTATCTTTCGTACAATTCCTCAAAT 89049 Query 37945 TCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCT 38004 |||| || | || ||| | || ||| ||| | |||| | | || | ||| || Sbjct 89050 TCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCG 89109 Query 38005 TCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCT 38064 ||| | |||||| | || ||| || | |||||| | ||| || || | ||||| ||| Sbjct 89110 CCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCT 89169 Query 38065 TTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCA 38124 | | ||| || || || || ||||| | | | || | || || || Sbjct 89170 CTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCG 89229 Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184 || |||||||| || | || | | | ||| || || | ||| | ||| || || | | Sbjct 89230 GCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCA 89289 Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244 | ||| | | | ||||| || | | || | ||| || | |||||||| || | ||| Sbjct 89290 ACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCG 89349 Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCA 38304 || |||| | || || | || | || || |||||| || ||| || |||||| Sbjct 89350 TTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCA 89409 Query 38305 CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTG 38364 || ||| ||| || |||||||| |||| || || ||||| | || ||||| || | Sbjct 89410 CCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAG 89469 Query 38365 TCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTA 38424 |||||| || | | || ||||| |||||||| || || || || |||||| Sbjct 89470 TCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTA 89529 Query 38425 AATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTA 38482 || | |||||||| ||||| |||| || ||| ||| |||| ||||| ||||| | Sbjct 89530 AACAGAGTAGGAGAGGCATGAGTGAA--ATACTTCTGACTCATAAAGTTATAAGTTTCAA 89587 Query 38483 TTACATCAT-CTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541 | || || | | || ||| | || ||||| || | || || | ||| | || ||||| Sbjct 89588 TAAC-TCTTGCAATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGA 89646 Query 38542 GGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATT 38601 || | |||| | ||| ||| | | || || || ||| |||| || || || | | Sbjct 89647 GGACGTTCTGCAACATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAAT 89706 Query 38602 CCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 ||||| || |||| |||| | ||||||||||| Sbjct 89707 CCAAAGTAGTTATACTGAA-AGTCTCTATCGTA 89738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524009364400