Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq20 154 2e-32
>seq20
Length=435382
Score = 154 bits (170), Expect = 2e-32
Identities = 590/919 (64%), Gaps = 25/919 (3%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| |||||| |||||||| || || || || || |||| || ||
Sbjct 329383 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 329324
Query 21245 TCCATAAAATCAAATGGATT-TTCAGATT-TAAATATTTTATTACAACCCAGTTCTGATA 21302
||||| || ||||||||||| || | || || | |||| | ||||| || |
Sbjct 329323 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTG--CCCAGAGCTACCA 329266
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|| ||| || || || || || | ||| || ||||| || || ||||| || | |
Sbjct 329265 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 329206
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422
| ||||||||||| | ||| || | |||||| || ||| || || || |
Sbjct 329205 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 329146
Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAAT----AATTGTTTAAACATCAAACAT 21478
| ||| || ||| | || || | | | || || ||| | ||| ||
Sbjct 329145 TCTTT----TCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAA 329090
Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538
||||| ||| || || || || || || | || | ||||| || || || |||||
Sbjct 329089 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 329030
Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598
||||| | |||||||| || ||||| || || || ||||| | |||||||||||| ||
Sbjct 329029 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 328970
Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658
|||||||| ||||| || ||||| || |||||| || | | || | ||| | |||
Sbjct 328969 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATC 328910
Query 21659 CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718
||| | ||||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 328909 CATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAAC 328850
Query 21719 AGATGAttt--ttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTT 21776
|| || || || | | ||| | ||| || | |
Sbjct 328849 AG--GAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCT 328792
Query 21777 CAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATT 21836
| || || || || || ||| ||||| || |||||||| ||| |||| || | | ||
Sbjct 328791 CGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTT 328732
Query 21837 GAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
||||||| | | | |||| || ||||||||||||| || || || ||| ||| |||
Sbjct 328731 GAACCTCAGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCA 328673
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCA 21951
|| || || | | | || || || ||| ||||| ||| || || |||||
Sbjct 328672 AAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATC-GTTCATACGATTATTCCA 328614
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011
|| ||||| || | |||| ||| |||| ||||||||| ||| ||||
Sbjct 328613 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 328554
Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGA 22071
|| ||||| ||||||||| | || | | || || | ||||| | | |||
Sbjct 328553 CTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAAC-GACGTTTAT 328495
Query 22072 T-TCAACTAAAAGTGGTTC 22089
| |||||||| ||||||||
Sbjct 328494 TCTCAACTAAGAGTGGTTC 328476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899902417400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |