Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq20 170 2e-37
seq23 82.4 9e-11
>seq20
Length=435382
Score = 170 bits (188), Expect = 2e-37
Identities = 583/901 (65%), Gaps = 17/901 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | ||||| ||||| || || || || |
Sbjct 329396 CATGACACCTGCCTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGC 329337
Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|||||| || | || | || | |||||| ||| |||| || ||||| |
Sbjct 329336 CAAAGAAATGTTCTCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCC 329277
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
|| | || || ||| ||||| || || || | ||||| ||||||| || ||
Sbjct 329276 CAGAGCTACCAGTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTT 329217
Query 92968 CATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026
||| || || ||| | ||||| |||||||| || ||| | ||| ||||| | || |
Sbjct 329216 CATCCCCAGTAAGGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAG 329158
Query 93027 CTTCTTTCAAGATTTCTATTAC--TCTACTATTTGG---TGGTTTTTGTACGACATAATT 93081
| ||| | | || | | || | | || ||| | | ||| | || | |||
Sbjct 329157 CCTCTGTGATAATCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATA 329098
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | |||| |||||||| || ||||| || ||||||| | || | |||||||
Sbjct 329097 GCA-----AGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGA 329043
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| || |||||||| | || |||| ||||| | ||| || || ||||||||| ||
Sbjct 329042 GAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCC 328983
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
||||| || ||||| || || || || || || || | |||||| || || |||
Sbjct 328982 TGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATC 328923
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | |||||| | | ||||| || || |||| || ||||| || | || ||
Sbjct 328922 GTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTC 328863
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| || || || ||| | || ||| | | |||| ||||| ||||| || | ||
Sbjct 328862 GATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAA 328803
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || | || || || | |||||||| || ||||| ||||| || ||| | ||
Sbjct 328802 GGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGC 328743
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | | || || || | || | || || | ||||||||||| ||||| ||
Sbjct 328742 TTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 328683
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT---TAAG 93558
|| || ||||| || || | | | || || ||| |||| ||| | || |
Sbjct 328682 AGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACG 328623
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
|||| ||| || | ||| || || || | ||| || |||||||||| || ||
Sbjct 328622 ATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGC 328563
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
||| || | |||||||| | ||| || || || || | | || || | ||||||||
Sbjct 328562 TTCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACG 328503
Query 93679 A 93679
|
Sbjct 328502 A 328502
>seq23
Length=366701
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/71 (89%), Gaps = 3/71 (4%)
Strand=Plus/Plus
Query 126272 TTGGCCGAGT-GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-GCGTGGGTT 126329
|||||||||| |||||||||||||||||| | | ||||| || ||| ||| |||||||||
Sbjct 177699 TTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGG-TCTCTCCGGAGGCGTGGGTT 177757
Query 126330 CGAACCCCACA 126340
|||||||||||
Sbjct 177758 CGAACCCCACA 177768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859860297400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |