Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08] 135 sequences; 9,359,904 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq12 214 2e-50 seq20 113 6e-20 >seq12 Length=271197 Score = 214 bits (236), Expect = 2e-50 Identities = 682/1042 (65%), Gaps = 23/1042 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || | ||||| || || ||||| || ||||| || || |||| ||| | || | Sbjct 89641 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89582 Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | || || ||| | | |||| |||| || || | || || || || |||||| Sbjct 89581 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89523 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 ||||| || || |||||||| |||||| | |||| | ||| || ||||| Sbjct 89522 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89463 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | |||||||||| ||| | | |||||||| |||||| || |||||||| || Sbjct 89462 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89403 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCA 111916 || ||||||| ||| || | | ||| ||| | || ||| ||||| || ||| Sbjct 89402 GGTTTGCACATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTAC 89344 Query 111917 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCA 111976 || ||||||||||||||||| | | || || ||| ||| || || ||||| |||| Sbjct 89343 TTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCA 89284 Query 111977 AGCTGGGCGTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGA 112030 || || || ||| | || ||| | || | ||| ||||||||||| || || Sbjct 89283 AGGTG---GTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGA 89227 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCG 112089 ||| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | | Sbjct 89226 CATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAG 89168 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 | | ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| Sbjct 89167 ACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCG 89108 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 ||||| | || || | |||| | || || || || |||| | | || || || | Sbjct 89107 ATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAAT 89048 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269 |||| | | ||| || ||||| | ||| |||| | | || | ||| Sbjct 89047 TTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCC 88988 Query 112270 CCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTT 112329 | | ||| | || || || || | ||||| || |||||||| |||| ||||| | Sbjct 88987 AAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGT 88928 Query 112330 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 112389 | || || || |||||| |||| | ||| || ||||| |||||||| || || || | Sbjct 88927 ATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTA 88868 Query 112390 ACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 112449 |||| || ||||| | |||| | | || ||||| ||||| |||||| | | Sbjct 88867 ACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGG 88808 Query 112450 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATG 112503 | || || ||||| || | ||| || | || || | || || | | || Sbjct 88807 CTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTG 88748 Query 112504 AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAA 112563 |||| || || ||| | || ||| || || ||| | |||||| |||| || |||| Sbjct 88747 AAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAA 88688 Query 112564 ATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 112622 |||||||||||||| ||| ||| | | ||| |||||| | | | || || | | | Sbjct 88687 ATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTG 88629 Query 112623 GGTGTCCAAGGTCTCGCGGATG 112644 ||||| |||||| | || |||| Sbjct 88628 GGTGTTCAAGGTTTAGCTGATG 88607 >seq20 Length=435382 Score = 113 bits (124), Expect = 6e-20 Identities = 349/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || |||||||||| || | || || || ||||| |||| ||| || | Sbjct 328857 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 328916 Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 | | | || || || ||||| || | | || || || ||||||||||||||| Sbjct 328917 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 328975 Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||| || || | ||| ||| |||| | ||| | |||||| ||||||||||||||||| Sbjct 328976 CTTTTCAGGAT-CTTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 329034 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGT 102334 | ||||||||| |||||||| | | ||||||||| | ||| || ||||| | | Sbjct 329035 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGCTTGCT 329094 Query 102335 GGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAA 102394 | ||||| ||| | || | ||| || || | || | ||| | | Sbjct 329095 TGCTATTTTCTCATT-TAAACAATAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATCAC 329152 Query 102395 GGAAGCCGTTGAGATTG--AGAAGGGA-TTCATATTGGATGCCCTTCCATGCGCTCTCAT 102451 || || || ||||| | | |||| | |||| | || || ||||| | | | | Sbjct 329153 AGAGGCTGTCGAGATCGAAAAAAGGTACTTCACA---GACGCTCTTCCTGTCTCCTTACT 329209 Query 102452 CGGTATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509 || ||||| ||| | ||||| | | ||| |||||| || |||| ||| | || Sbjct 329210 GGGGATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGACAGACTACTG 329267 Query 102510 AAGCAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGA 102567 | || || ||| | || | | ||| ||| |||||||||||||||||||||| Sbjct 329268 --GTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAACAATCCATTTGACTTCATGGAGA 329325 Query 102568 ACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611 ||||| | | ||| || || ||||||||||||||||| ||| Sbjct 329326 ACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAAGAGAGTT 329369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741352497200