Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08] 135 sequences; 9,359,904 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 >seq6 Length=150810 Score = 143 bits (158), Expect = 3e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||||| ||||| ||||||| || || || || | || || | || ||| Sbjct 13412 ATTGGTAAAGGATTTTATGGCACCATTATCCCTCCTGTGATTCTTCGTAATTTGCTCGAG 13471 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||||| | ||||||||||||||||| || ||||| | || || ||||||| ||||| Sbjct 13472 AATCCAGGATGGTACACATCTTACACCCCATATCAGCCCGAAGTAAGTCAGGGACGATTG 13531 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 ||| |||| |||||| |||||| |||||| || || ||||| | || | || || Sbjct 13532 GAAAGTTTACTCAATTTCCAAACTGTCATCAGTGATCTGACAGGCCTCCCGGTCGCCAAT 13591 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || ||||| || ||||| | ||||||| |||||||||||| Sbjct 13592 GCTTCTCTTTTGGATGAGTCGTCTGCAGCTGCAGAAGCAATG 13633 Score = 114 bits (126), Expect = 1e-20 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATAT 154929 ||| ||| |||| ||||| || ||| |||| | |||||| || |||| | | || Sbjct 15109 TATGATGGTTACCTACCCTTCCACATATGGACTTTTTGAACCTGGTATTATTGATGCCAT 15168 Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989 || ||| | ||| || |||||||||| |||||| | ||||| || || | ||||| | Sbjct 15169 C-AATATCATCCATAACCATGGTGGTCAAGTATATTTAGATGGTGCTAACATGAATGCTC 15227 Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049 | || ||| || || ||| | || || || ||||||||||||||||| ||||||| Sbjct 15228 AAGTGGGATTAACATCCCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTACATA 15287 Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || || ||||| ||||| || ||||| || || || || ||||| |||| Sbjct 15288 AGACTTTTGCCATTCCTCATGGCGGAGGAGGACCGGGTGTTGGCCCTATTTGTGT 15342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211822578400