Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq20 289 3e-73
seq12 244 1e-59
>seq20
Length=435382
Score = 289 bits (320), Expect = 3e-73
Identities = 613/901 (68%), Gaps = 19/901 (2%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || || | |||||| ||||| ||||| || ||||| || | || || ||
Sbjct 329383 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 329324
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||||| || ||||||||||| || || || || | |||||| || | ||| |||
Sbjct 329323 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 329264
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || || || | || ||| | ||||| || ||||| || | |||
Sbjct 329263 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 329204
Query 18850 TTAACAGGTAGTGCATCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
||||| || || ||||| ||| | | || ||| || | || ||||||| |||||
Sbjct 329203 GAGACAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAAT 329145
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGA--AGATGTTTAAACATCAAACATGCA 18966
| |||| | || ||| | | ||| | | ||| ||| | ||| || |||
Sbjct 329144 CTTTTCAACGATTTCCTCACTGGCTC--TATTGTTTAAATGAGAAAATAGCAAGCAAGCA 329087
Query 18967 AAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGC 19026
|| ||| |||| |||||||||||| | || | ||||| || || || ||||| |||
Sbjct 329086 AAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGC 329027
Query 19027 ATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCT 19086
|| || ||||| || || |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct 329026 ATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCC 328967
Query 19087 TCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCA 19145
|| || || || || ||||| | | ||| | ||| | ||||| | || | ||||||
Sbjct 328966 TCAACAGCAGCGAAGGCAACCAAACGTTCAGC-GAACAATGCATCGTCATCAGAAATCCA 328908
Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205
| ||| ||||| |||||||| | ||| | |||||| || ||||| || | ||| || ||
Sbjct 328907 TCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAG 328848
Query 19206 --ATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
|| || | ||| | || |||||| | || | ||| |||| || ||| | ||
Sbjct 328847 GAATTCAGA--CTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCG 328790
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
|| ||||| || || || ||||| || |||||||| ||| ||||||| | | ||
Sbjct 328789 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGA 328730
Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383
|| ||| || || |||| ||||| |||||||| || || || ||| || |||||
Sbjct 328729 ACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAG 328670
Query 19384 AATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAAT 19438
|| || | || | | | || || |||||||| | ||| || ||||||| |
Sbjct 328669 AAGGCAAGGAC-TCTCGAGATGAAGAATTTTTCAT-TATCGTTCATACGATTATTCCAGT 328612
Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498
||| | ||| ||| | |||| ||| ||| | |||||||| ||||| || || | |
Sbjct 328611 CATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCT 328552
Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT 19558
| ||||| | ||| ||||| | || | | ||| || | ||||| | | |||||| |
Sbjct 328551 TGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACGACGTTTATTCT 328492
Query 19559 C 19559
|
Sbjct 328491 C 328491
>seq12
Length=271197
Score = 244 bits (270), Expect = 1e-59
Identities = 623/945 (66%), Gaps = 6/945 (1%)
Strand=Plus/Plus
Query 47876 AAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTAT 47935
||| || ||||| || | ||||| ||||| ||| | || || |||| | ||
Sbjct 88794 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAAT 88853
Query 47936 TTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTAttnnnnttGTT 47995
|||| || || ||| |||| || |||||| || | || ||| | |||||
Sbjct 88854 TTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTT 88913
Query 47996 ACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGA 48055
||| || ||||| || ||||| || || || ||||||||| | || | |||| ||| |
Sbjct 88914 ACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGC 88973
Query 48056 TTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGT 48115
| ||||| | || || || ||| | | || | ||||||| |
Sbjct 88974 GTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 89033
Query 48116 ATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACA 48175
|| || | |||||||||||| ||||| || | | | |||||| |||| | ||| |
Sbjct 89034 GTACAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGA 89093
Query 48176 CATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAG 48235
| || | |||||| ||| | || |||||| |||| || | ||| || ||||| |
Sbjct 89094 GAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAA 89153
Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAG 48295
||| ||||| || |||| ||| | || || || ||| ||| | || ||||
Sbjct 89154 AGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAATATCAAT 89213
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTT 48355
||| | | || || ||||||||||| || || || | || | | |||| || |||||
Sbjct 89214 GAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAGGACGTTT 89273
Query 48356 ATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAAT 48415
||||| ||||| || | ||| | ||||| ||||| | || || | |||||| | |||
Sbjct 89274 GTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAAT 89333
Query 48416 ACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT 48475
|||||| || |||| || || || | ||| || ||| | || | |||||| |||
Sbjct 89334 ACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAAT 89393
Query 48476 -TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCAT 48534
|| || ||| || ||||| || |||| || |||| |||||| || | ||||| |
Sbjct 89394 GTGCAA-ACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATCGT 89452
Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGAT 48594
|||| ||||| || ||||| ||| | || ||||| |||||||| || |
Sbjct 89453 AAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGGGT 89512
Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCT--CTGATAA 48652
|| || || | ||||| | || ||||| |||||| | || | |||| || |||
Sbjct 89513 GAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAAATACTTCTGACTCATA- 89571
Query 48653 CAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACG 48712
|| ||||| ||||||||||| | || || ||| || || |||| |||||
Sbjct 89572 -AAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACACG 89630
Query 48713 CATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTT 48772
||| | || | |||||| | ||| ||| || ||| ||| ||| ||| || ||| |
Sbjct 89631 CATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATTAATTCTCAGAAGGTAAGATCT 89690
Query 48773 TTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATC 48817
|||||| || || || ||||| ||||| || |||||| ||||
Sbjct 89691 TTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTCTCTATC 89735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107851441400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |