Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq12 246 4e-60
seq20 96.9 4e-15
>seq12
Length=271197
Score = 246 bits (272), Expect = 4e-60
Identities = 800/1229 (65%), Gaps = 29/1229 (2%)
Strand=Plus/Minus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
|| || | ||||| || || |||||||| || || || ||||||| || | || |
Sbjct 89641 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89582
Query 75279 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 75337
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 89581 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89523
Query 75338 GGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 75397
||||| || || || ||||| || ||| | | |||| ||| ||||||||
Sbjct 89522 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89463
Query 75398 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 75457
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 89462 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89403
Query 75458 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 75517
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 89402 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 89343
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 89342 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 89283
Query 75578 GCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATAT 75633
| | || | | | ||| ||| || | |||||||| |||||||||||||| ||
Sbjct 89282 G-GTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 89224
Query 75634 CATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATC 75692
| | | ||| |||| | || ||||| ||| | || ||| || | | ||||||
Sbjct 89223 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGA-TCAGAGCTAGAGACT 89165
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
| || | | ||||||| || || || |||||||| | || || || ||| | |
Sbjct 89164 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 89105
Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812
|| | || |||| |||| | || || || || |||||| || || || ||||
Sbjct 89104 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 89045
Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCC 75868
| | | ||| || || ||| |||| ||| | || ||| || | ||||
Sbjct 89044 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCC 88989
Query 75869 GCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTT 75928
| ||||| | || || || | |||| || || ||||| || |||| |||||
Sbjct 88988 CAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTG 88929
Query 75929 TACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCA 75988
|| ||||||||||||||||| || | |||||| ||||| ||||| || || |||
Sbjct 88928 TATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCT 88869
Query 75989 AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTG 76048
|| |||||| |||||| | || ||| | ||| ||||| ||||| || || |||
Sbjct 88868 AACCTTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTG 88809
Query 76049 GCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCACTTTTGAT-----T 76100
|| || || || |||||| | ||| | || || |||| ||| || | |
Sbjct 88808 GCTTCTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTC--ACTGCTGGTACAACT 88751
Query 76101 ATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160
|||||| || ||||||||||| || | ||||| || | ||| || | || ||||
Sbjct 88750 TTGAAAAGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACA 88691
Query 76161 GAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219
|||||||||| |||||| ||| || | | || |||||||| | |||||||| | |
Sbjct 88690 GAAATTTTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCT 88632
Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGAT 76279
|||||||||||||| | || |||| ||||| || | | ||||||||
Sbjct 88631 GTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCA 88572
Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339
|||||||| || | ||| || || |||||||| || || || ||| | |||| ||
Sbjct 88571 GAAGCCAAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGCC 88512
Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399
||||| || | | |||| |||| || || || | |||||||| || ||
Sbjct 88511 TCCAACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCT 88452
Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGA 76428
|| || | | || | ||| |||||||
Sbjct 88451 CAGGGCATTTTGCAATATGACTTGTGGGA 88423
>seq20
Length=435382
Score = 96.9 bits (106), Expect = 4e-15
Identities = 167/238 (70%), Gaps = 10/238 (4%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT--- 65052
|||||| | || | |||||||| | | ||||| | ||||| |||| |||| ||
Sbjct 328857 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 328916
Query 65053 GAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTAT 65111
|| || | | | | ||||| || || | |||| || || ||| ||||||||
Sbjct 328917 GATGACGATGCATTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTAT 328972
Query 65112 CTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAG 65170
|||||| || || || || ||| |||| | |||||||||||| | |||||||||||||
Sbjct 328973 CTTCTTTTCAGGATC-TTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAG 329031
Query 65171 GCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| | |||||| ||||| ||||||| | |||| ||||| | ||| || |||||
Sbjct 329032 GTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 329089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568593288800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |